Basic Statistics
Measure | Value |
---|---|
Filename | read2.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 124291599 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CATATAG | 37985 | 0.0 | 14.51404 | 12 |
ATATAGT | 44920 | 0.0 | 12.341872 | 13 |
CGATTAG | 6430 | 0.0 | 11.750227 | 45 |
TCATATA | 48085 | 0.0 | 11.544348 | 11 |
GCGCTAA | 10210 | 0.0 | 11.520061 | 42 |
TATAGTA | 49990 | 0.0 | 11.18606 | 14 |
CGACCGT | 12175 | 0.0 | 10.938935 | 1 |
CGGTAGG | 8030 | 0.0 | 10.313099 | 60 |
GCCTATC | 53790 | 0.0 | 10.3014555 | 6 |
TCGCGTT | 9590 | 0.0 | 10.28714 | 33 |
ATAGTAA | 56795 | 0.0 | 10.040521 | 15 |
TAACAGG | 56760 | 0.0 | 10.00221 | 40 |
TAGTAAA | 57610 | 0.0 | 9.88653 | 16 |
ACCGTTG | 13610 | 0.0 | 9.836506 | 3 |
TATATCG | 18270 | 0.0 | 9.66611 | 35 |
TATTCGG | 28770 | 0.0 | 9.60568 | 49 |
GTAAAAC | 58285 | 0.0 | 9.5765295 | 18 |
CGGCCTA | 36020 | 0.0 | 9.522421 | 69 |
CACATGC | 62005 | 0.0 | 9.426347 | 1 |
CGCTAAG | 12790 | 0.0 | 9.332412 | 43 |