Module Section Sample Name Source Picard GcBiasDetailMetrics sBC_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round2.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round1.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sBC_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sMTL_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round3.cram.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round2.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round1.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round3.bam.gcmets.txt Picard GcBiasDetailMetrics sTOR_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round3.bam.gcmets.txt Picard GcBiasSummaryMetrics sBC_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round2.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round1.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round1.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round3.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round3.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round2.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round1.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round3.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round2.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round2.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round2.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round3.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sMTL_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round1.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round3.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round1.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sTOR_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round1.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round2.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round3.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round2.cram.bam.gc.summary.txt Picard GcBiasSummaryMetrics sBC_pTOR_NA24143_round3 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/projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round1.bam.stats Samtools stats sTOR_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round3.bam.stats Samtools stats sTOR_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round3.cram.bam.stats Samtools stats sTOR_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round3.cram.bam.stats Samtools stats sTOR_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round1.cram.bam.stats Samtools stats sTOR_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round2.bam.stats Samtools stats sTOR_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round2.bam.stats Samtools stats sTOR_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round1.bam.stats Samtools stats sTOR_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round3.bam.stats Samtools stats sMTL_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round2.cram.bam.stats QualiMap mapped_gc_distribution sTOR_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sBC_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round2.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sMTL_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round3.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round1.cram/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round2/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round1/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap mapped_gc_distribution sTOR_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round3/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt QualiMap insert_size_histogram sTOR_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round1.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round2.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24149_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24149_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24385_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round2.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pTOR_NA24149_round3 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QualiMap insert_size_histogram sTOR_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round3.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round2.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24385_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pBC_NA24385_round3 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insert_size_histogram sBC_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24149_round3.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round2.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round3.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24385_round1.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pBC_NA24149_round1 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insert_size_histogram sBC_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round2.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pTOR_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round3.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pTOR_NA24143_round1.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sBC_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pMTL_NA24143_round2 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insert_size_histogram sMTL_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round3.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round2.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round1.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pTOR_NA24149_round1 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QualiMap insert_size_histogram sMTL_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round2.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round1.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sMTL_pMTL_NA24149_round3 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QualiMap insert_size_histogram sTOR_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round1.cram/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round2/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round1/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap insert_size_histogram sTOR_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round3/raw_data_qualimapReport/insert_size_histogram.txt QualiMap genome_results sTOR_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24143_round1.cram/genome_results.txt QualiMap genome_results sBC_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round1/genome_results.txt QualiMap genome_results sBC_pBC_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round1/genome_results.txt QualiMap genome_results sMTL_pTOR_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round2.cram/genome_results.txt QualiMap genome_results sBC_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round3/genome_results.txt QualiMap genome_results sBC_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24149_round2/genome_results.txt QualiMap genome_results sBC_pMTL_NA24149_round2 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/projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pBC_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pBC_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24149_round3/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sBC_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sBC_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24385_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sBC_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pMTL_NA24143_round3/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sBC_pTOR_NA24143_round2 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sBC_pBC_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round3/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sBC_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24143_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sBC_pBC_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sBC_pBC_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sBC_pBC_NA24385_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round2.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round3.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pTOR_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round2.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24385_round1.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pMTL_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round3/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24149_round1.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pTOR_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pTOR_NA24143_round1.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pMTL_NA24385_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24385_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pMTL_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24385_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pBC_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pBC_NA24143_round3/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pMTL_NA24143_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pTOR_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round2.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pTOR_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round1.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pMTL_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24143_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round3/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sMTL_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sMTL_pMTL_NA24149_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pMTL_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24143_round3/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pTOR_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24149_round3.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pTOR_NA24385_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round3.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pTOR_NA24385_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pTOR_NA24385_round1.cram/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pBC_NA24143_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pMTL_NA24149_round2 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round2/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pMTL_NA24149_round1 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round1/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pMTL_NA24149_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pMTL_NA24149_round3/raw_data_qualimapReport/coverage_histogram.txt QualiMap coverage_histogram sTOR_pBC_NA24143_round3 /projects/rcorbettprj2/CGEN/GIAB2/multiqc3/sTOR_pBC_NA24143_round3/raw_data_qualimapReport/coverage_histogram.txt