##fileformat=VCFv4.3
##fileDate=20230120
##source=nanomonsv-0.5.0
##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa
##contig=<ID=chr1,length=248956422>
##contig=<ID=chr2,length=242193529>
##contig=<ID=chr3,length=198295559>
##contig=<ID=chr4,length=190214555>
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##contig=<ID=chr6,length=170805979>
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##contig=<ID=chr15,length=101991189>
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##contig=<ID=chr17,length=83257441>
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##contig=<ID=chr19,length=58617616>
##contig=<ID=chr20,length=64444167>
##contig=<ID=chr21,length=46709983>
##contig=<ID=chr22,length=50818468>
##contig=<ID=chrX,length=156040895>
##contig=<ID=chrY,length=57227415>
##contig=<ID=chrM,length=16569>
##contig=<ID=chr1_KI270706v1_random,length=175055>
##contig=<ID=chr1_KI270707v1_random,length=32032>
##contig=<ID=chr1_KI270708v1_random,length=127682>
##contig=<ID=chr1_KI270709v1_random,length=66860>
##contig=<ID=chr1_KI270710v1_random,length=40176>
##contig=<ID=chr1_KI270711v1_random,length=42210>
##contig=<ID=chr1_KI270712v1_random,length=176043>
##contig=<ID=chr1_KI270713v1_random,length=40745>
##contig=<ID=chr1_KI270714v1_random,length=41717>
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##contig=<ID=chr2_KI270716v1_random,length=153799>
##contig=<ID=chr3_GL000221v1_random,length=155397>
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##contig=<ID=chr5_GL000208v1_random,length=92689>
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##contig=<ID=chr9_KI270719v1_random,length=176845>
##contig=<ID=chr9_KI270720v1_random,length=39050>
##contig=<ID=chr11_KI270721v1_random,length=100316>
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##contig=<ID=chr14_GL000225v1_random,length=211173>
##contig=<ID=chr14_KI270722v1_random,length=194050>
##contig=<ID=chr14_GL000194v1_random,length=191469>
##contig=<ID=chr14_KI270723v1_random,length=38115>
##contig=<ID=chr14_KI270724v1_random,length=39555>
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##contig=<ID=chr15_KI270727v1_random,length=448248>
##contig=<ID=chr16_KI270728v1_random,length=1872759>
##contig=<ID=chr17_GL000205v2_random,length=185591>
##contig=<ID=chr17_KI270729v1_random,length=280839>
##contig=<ID=chr17_KI270730v1_random,length=112551>
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##contig=<ID=chrUn_KI270581v1,length=7046>
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##contig=<ID=chrUn_KI270329v1,length=1040>
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##contig=<ID=chrUn_KI270378v1,length=1048>
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##contig=<ID=chrUn_KI270386v1,length=1788>
##contig=<ID=chrUn_KI270391v1,length=1484>
##contig=<ID=chrUn_KI270383v1,length=1750>
##contig=<ID=chrUn_KI270393v1,length=1308>
##contig=<ID=chrUn_KI270384v1,length=1658>
##contig=<ID=chrUn_KI270392v1,length=971>
##contig=<ID=chrUn_KI270381v1,length=1930>
##contig=<ID=chrUn_KI270385v1,length=990>
##contig=<ID=chrUn_KI270382v1,length=4215>
##contig=<ID=chrUn_KI270376v1,length=1136>
##contig=<ID=chrUn_KI270374v1,length=2656>
##contig=<ID=chrUn_KI270372v1,length=1650>
##contig=<ID=chrUn_KI270373v1,length=1451>
##contig=<ID=chrUn_KI270375v1,length=2378>
##contig=<ID=chrUn_KI270371v1,length=2805>
##contig=<ID=chrUn_KI270448v1,length=7992>
##contig=<ID=chrUn_KI270521v1,length=7642>
##contig=<ID=chrUn_GL000195v1,length=182896>
##contig=<ID=chrUn_GL000219v1,length=179198>
##contig=<ID=chrUn_GL000220v1,length=161802>
##contig=<ID=chrUn_GL000224v1,length=179693>
##contig=<ID=chrUn_KI270741v1,length=157432>
##contig=<ID=chrUn_GL000226v1,length=15008>
##contig=<ID=chrUn_GL000213v1,length=164239>
##contig=<ID=chrUn_KI270743v1,length=210658>
##contig=<ID=chrUn_KI270744v1,length=168472>
##contig=<ID=chrUn_KI270745v1,length=41891>
##contig=<ID=chrUn_KI270746v1,length=66486>
##contig=<ID=chrUn_KI270747v1,length=198735>
##contig=<ID=chrUn_KI270748v1,length=93321>
##contig=<ID=chrUn_KI270749v1,length=158759>
##contig=<ID=chrUn_KI270750v1,length=148850>
##contig=<ID=chrUn_KI270751v1,length=150742>
##contig=<ID=chrUn_KI270752v1,length=27745>
##contig=<ID=chrUn_KI270753v1,length=62944>
##contig=<ID=chrUn_KI270754v1,length=40191>
##contig=<ID=chrUn_KI270755v1,length=36723>
##contig=<ID=chrUn_KI270756v1,length=79590>
##contig=<ID=chrUn_KI270757v1,length=71251>
##contig=<ID=chrUn_GL000214v1,length=137718>
##contig=<ID=chrUn_KI270742v1,length=186739>
##contig=<ID=chrUn_GL000216v2,length=176608>
##contig=<ID=chrUn_GL000218v1,length=161147>
##contig=<ID=chrEBV,length=171823>
##FILTER=<ID=Duplicate_with_close_SV,Description="When multiple SVs that share breakpoints in close proximity are detected, all but one SVs are filtered.">
##FILTER=<ID=Duplicate_with_insertion,Description="Breakend SVs that are inferred to be the same as any of detected insertions">
##FILTER=<ID=Duplicate_with_close_insertion,Description="When multiple insertions in close proximity are detected, all but one insertions are filtered.">
##FILTER=<ID=SV_with_decoy,Description="SVs involving decoy contigs">
##FILTER=<ID=Too_small_size,Description="Insertions whose size is below the threshould (currently 100bp)">
##FILTER=<ID=Too_low_VAF,Description="SVs whose variant allele frequencies are inferred to be low">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=MATEID,Number=1,Type=String,Description="ID of mate breakend">
##INFO=<ID=SVINSLEN,Number=1,Type=Integer,Description="Length of insertion">
##INFO=<ID=SVINSSEQ,Number=1,Type=String,Description="Sequence of insertion">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=INS,Description="Insertion">
##ALT=<ID=DUP,Description="Duplication">
##FORMAT=<ID=TR,Number=1,Type=Integer,Description="The number of reads around the breakpoints">
##FORMAT=<ID=VR,Number=1,Type=Integer,Description="The number of variant supporting reads determined in the validation realignment step">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	TUMOR	CONTROL
chr16	53666557	r_139	A	<DUP>	.	PASS	END=54278157;SVTYPE=DUP;SVLEN=611600	TR:VR	84:19	62:0
chr2	43892721	r_209	T	<DEL>	.	PASS	END=44713600;SVTYPE=DEL;SVLEN=-820879;SVINSLEN=22;SVINSSEQ=AATCTCCCTGTATGTGTATGTG	TR:VR	76:13	52:0
chr20	12280649	d_1301	G	<DEL>	.	PASS	END=12290159;SVTYPE=DEL;SVLEN=-9510	TR:VR	62:6	26:0
chr20	43793788	r_249_0	C	C]chr20:46617027]	.	PASS	SVTYPE=BND;MATEID=r_249_1	TR:VR	285:62	54:0
chr20	46617027	r_249_1	C	C]chr20:43793788]	.	PASS	SVTYPE=BND;MATEID=r_249_0	TR:VR	285:62	54:0
chr22	12356763	d_1508	A	<INS>	.	Too_low_VAF	END=12356871;SVTYPE=INS;SVINSLEN=110;SVINSSEQ=GAAAGTTTCAACTCTGTGAGATGAAAGCTCACACATAACAAAGAATTTTCTCACATTGCTTCTGTGTAGATGTTAGGTGAAGATATTTCCTTTTCTACCATAGGCCACAG	TR:VR	181:5	104:0
chr5	35439510	r_302_0	C	[chr5:56990060[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_302_1	TR:VR	92:3	57:0
chr5	56990060	r_302_1	C	[chr5:35439510[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_302_0	TR:VR	92:3	57:0
chr6	61959215	r_397_0	G	G[chrX:65220374[	.	PASS	SVTYPE=BND;MATEID=r_397_1	TR:VR	62:9	53:0
chrX	65220374	r_397_1	A	]chr6:61959215]A	.	PASS	SVTYPE=BND;MATEID=r_397_0	TR:VR	62:9	53:0
chr10	735894	d_342	C	<DEL>	.	Too_low_VAF	END=736818;SVTYPE=DEL;SVLEN=-924;SVINSLEN=151;SVINSSEQ=CCGGGGATGAGTGAGGCTCCAGACCCGGATAGAGTGAGGCTCCAGACCCGGGACAGAGTGAGGGCTCCAGACCCGGACAGAGGGAGGCTCCAGACCCGGACAGAGGGAGGCTCCAGACCCGGACAGAGGGAGGCTCCAGACCCGGATAGAG	TR:VR	66:3	31:0
chr16	57138972	d_989	A	<DEL>	.	PASS	END=57139261;SVTYPE=DEL;SVLEN=-289	TR:VR	48:7	33:0
chr6	62143420	r_398	A	<DUP>	.	PASS	END=63645850;SVTYPE=DUP;SVLEN=1502430	TR:VR	89:16	52:0
chr8	99827963	r_459	T	<DUP>	.	Too_low_VAF	END=99987706;SVTYPE=DUP;SVLEN=159743	TR:VR	217:3	74:0
chr1	103938221	r_7_0	T	T[chrX:23508529[	.	PASS	SVTYPE=BND;MATEID=r_7_1	TR:VR	54:3	66:0
chrX	23508529	r_7_1	G	]chr1:103938221]G	.	PASS	SVTYPE=BND;MATEID=r_7_0	TR:VR	54:3	66:0
chr12	20046369	r_84	G	<DUP>	.	PASS	END=20047888;SVTYPE=DUP;SVLEN=1519	TR:VR	74:7	33:0
chr16	67840274	i_465	C	<INS>	.	PASS	END=67840274;SVTYPE=INS;SVINSLEN=459;SVINSSEQ=GCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAGATGTGGAGCGCAGAACATGAGGTCGGTAGGGCCAGACTGAAAATACCTTGTGTGTGGCCTGGCTCATGCCTGTAATCCCAGTACTTTAGGAGACTGAGGCGGGCAGGTCACTTGAGTTCAGGAGTTCGAGAACAGCCTGGCCAACATGGCGAAACCCCATCTCTCCTAAAAATACAAAAATTAGCCAGGCGCTAATAATAGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTCCTAAAAATACAAAAAAAAAAAAAAAAAAGCCAGGCATGGTGGCAGGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGAAGGTTGCAGTGAGCCGAGATCATG	TR:VR	38:10	24:0
chr19	36203083	r_189_0	C	[chr19:40493582[G	.	PASS	SVTYPE=BND;MATEID=r_189_1	TR:VR	118:35	50:0
chr19	40493582	r_189_1	G	[chr19:36203083[G	.	PASS	SVTYPE=BND;MATEID=r_189_0	TR:VR	118:35	50:0
chr2	56705171	r_210	A	<DUP>	.	PASS	END=58474935;SVTYPE=DUP;SVLEN=1769764	TR:VR	102:21	57:0
chr20	13669982	i_855	C	<INS>	.	PASS	END=13669982;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=TTCTTCATGCTTTTCTGTTTGGGAAGTTTCTATTGTCATATCCTTAAGCTCAGAGATTCTTTCCTCAACCAAGTCCAAGTGTACTAGTAAGCCCATCAAAAAGCATTCTTCATTTATGTTACAGGGTTTTTGATATC	TR:VR	58:3	22:0
chr20	31056032	d_1337	G	<DEL>	.	Too_low_VAF	END=31056292;SVTYPE=DEL;SVLEN=-260;SVINSLEN=36;SVINSSEQ=GAATGGAATGGAATTGAATGGAATGAAACGCGAGTG	TR:VR	637:4	299:0
chr20	45993896	r_250_0	A	[chr20:46058788[C	.	PASS	SVTYPE=BND;MATEID=r_250_1	TR:VR	271:70	37:0
chr20	46058788	r_250_1	C	[chr20:45993896[C	.	PASS	SVTYPE=BND;MATEID=r_250_0	TR:VR	271:70	37:0
chr5	1273849	i_1251	C	<INS>	.	PASS	END=1273849;SVTYPE=INS;SVINSLEN=229;SVINSSEQ=CACACATCAGACCCCACGACTATTCATCCACAGCCGCCCCACACATCAGACCCCACTACCGCCATCCACAGTCACCACACATCAGACCCCACGACCGCCATCCACAGTCACCACACATCCAGACCCCACGACCGGCCATGTCCACAGTCACCACACATCAGACCCCACGACCATGACCATCCACAGCCGCCCACACATCAGACCCCACGACCGGCATCCATGGTCACGG	TR:VR	62:8	25:0
chr6	170217384	d_1812	G	<DEL>	.	PASS	END=170218569;SVTYPE=DEL;SVLEN=-1185;SVINSLEN=42;SVINSSEQ=GGAGCACTGAAGACTCCACACGGGGAGTCAGTACTGAGAGAC	TR:VR	43:4	20:0
chr6	3760249	r_323	G	<DEL>	.	PASS	END=9155818;SVTYPE=DEL;SVLEN=-5395569	TR:VR	100:28	63:0
chr6	62377506	r_399_0	C	[chrX:85856762[C	.	PASS	SVTYPE=BND;MATEID=r_399_1	TR:VR	125:25	50:0
chrX	85856762	r_399_1	C	[chr6:62377506[C	.	PASS	SVTYPE=BND;MATEID=r_399_0	TR:VR	125:25	50:0
chr8	137403688	r_471_0	A	A]chr8:139996087]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_471_1	TR:VR	186:8	51:0
chr8	139996087	r_471_1	A	A]chr8:137403688]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_471_0	TR:VR	186:8	51:0
chr17	26620133	r_150_0	T	T]chr19:36205767]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_150_1	TR:VR	512:3	299:0
chr19	36205767	r_150_1	G	G]chr17:26620133]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_150_0	TR:VR	512:3	299:0
chr19	36203308	r_190_0	C	C]chr19:40143844]	.	PASS	SVTYPE=BND;MATEID=r_190_1	TR:VR	117:35	53:0
chr19	40143844	r_190_1	G	G]chr19:36203308]	.	PASS	SVTYPE=BND;MATEID=r_190_0	TR:VR	117:35	53:0
chr20	45996475	r_251_0	A	[chr20:54873125[A	.	PASS	SVTYPE=BND;MATEID=r_251_1	TR:VR	324:68	36:0
chr20	54873125	r_251_1	A	[chr20:45996475[A	.	PASS	SVTYPE=BND;MATEID=r_251_0	TR:VR	324:68	36:0
chr3	195781573	d_1593	G	<INS>	.	PASS	END=195781656;SVTYPE=INS;SVINSLEN=131;SVINSSEQ=AGGAAGTGCTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGATGCCGAGGAAACGTTGGTGACAGGAAGACGGGTGGTGTCACCTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGATGGGTGGCGTGA	TR:VR	47:3	14:0
chr5	1275927	d_1714	A	<INS>	.	Too_low_VAF	END=1275962;SVTYPE=INS;SVINSLEN=35;SVINSSEQ=CATACCCCACACATGAAAACCAATCCCACAGATCC	TR:VR	66:3	25:0
chr6	37842508	r_347_0	T	]chrX:73260810]C	.	PASS	SVTYPE=BND;MATEID=r_347_1	TR:VR	83:16	42:0
chrX	73260810	r_347_1	C	C[chr6:37842508[	.	PASS	SVTYPE=BND;MATEID=r_347_0	TR:VR	83:16	42:0
chr6	62578497	r_400	T	<DEL>	.	PASS	END=63067144;SVTYPE=DEL;SVLEN=-488647	TR:VR	125:13	42:0
chr9	112733714	r_487_0	C	C]chrX:85074939]	.	PASS	SVTYPE=BND;MATEID=r_487_1	TR:VR	52:14	46:0
chrX	85074939	r_487_1	C	C]chr9:112733714]	.	PASS	SVTYPE=BND;MATEID=r_487_0	TR:VR	52:14	46:0
chr1	230335108	d_306	C	<DEL>	.	PASS	END=230335573;SVTYPE=DEL;SVLEN=-465;SVINSLEN=93;SVINSSEQ=AGATACACAGATACAGACACATACACATACATACACAGGTACACATACAGACACACACAGACACACAGACACACAGACTTACAGACACACACA	TR:VR	61:4	30:0
chr14_GL000225v1_random	64032	r_120	G	<DEL>	.	Too_low_VAF	END=65574;SVTYPE=DEL;SVLEN=-1542;SVINSLEN=7;SVINSSEQ=ACTCCAA	TR:VR	790:3	662:0
chr17	26621159	r_151_0	T	T]chr17:60810855]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_151_1	TR:VR	508:14	239:0
chr17	60810855	r_151_1	C	C]chr17:26621159]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_151_0	TR:VR	508:14	239:0
chr19	36205287	r_191	G	<DUP>	.	PASS	END=36221338;SVTYPE=DUP;SVLEN=16051	TR:VR	103:51	33:0
chr20	45996638	r_252_0	C	C]chr20:54879238]	.	PASS	SVTYPE=BND;MATEID=r_252_1	TR:VR	331:29	42:0
chr20	54879238	r_252_1	T	T]chr20:45996638]	.	PASS	SVTYPE=BND;MATEID=r_252_0	TR:VR	331:29	42:0
chr5	68353959	d_1755	A	<DEL>	.	PASS	END=68356614;SVTYPE=DEL;SVLEN=-2655	TR:VR	36:8	28:0
chr6	37911654	r_348_0	C	[chrX:93929758[T	.	PASS	SVTYPE=BND;MATEID=r_348_1	TR:VR	80:20	61:0
chrX	93929758	r_348_1	T	[chr6:37911654[T	.	PASS	SVTYPE=BND;MATEID=r_348_0	TR:VR	80:20	61:0
chr6	62614635	r_401_0	G	G]chrX:77287719]	.	PASS	SVTYPE=BND;MATEID=r_401_1	TR:VR	83:27	62:0
chrX	77287719	r_401_1	T	T]chr6:62614635]	.	PASS	SVTYPE=BND;MATEID=r_401_0	TR:VR	83:27	62:0
chr9	113267535	r_488	A	<DUP>	.	PASS	END=113393092;SVTYPE=DUP;SVLEN=125557	TR:VR	139:22	51:0
chrX	90706065	r_526	T	<DEL>	.	PASS	END=94795093;SVTYPE=DEL;SVLEN=-4089028	TR:VR	46:16	44:0
chr10	737159	d_345	C	<DEL>	.	PASS	END=738046;SVTYPE=DEL;SVLEN=-887;SVINSLEN=26;SVINSSEQ=CCGGATAGAGTGAGGCTCCAGACCCA	TR:VR	82:7	35:1
chr2	57799990	r_211_0	A	A]chr2:63356495]	.	PASS	SVTYPE=BND;MATEID=r_211_1	TR:VR	125:10	53:0
chr2	63356495	r_211_1	G	G]chr2:57799990]	.	PASS	SVTYPE=BND;MATEID=r_211_0	TR:VR	125:10	53:0
chr20	46015015	r_253_0	A	[chr20:47345167[GGGCTGGGGTGTTTATAAAGAAGATGGCAAAAAAAATGACA	.	PASS	SVTYPE=BND;MATEID=r_253_1;SVINSLEN=40;SVINSSEQ=GGGCTGGGGTGTTTATAAAGAAGATGGCAAAAAAAATGAC	TR:VR	265:74	42:0
chr20	47345167	r_253_1	A	[chr20:46015015[GTCATTTTTTTTGCCATCTTCTTTATAAACACCCCAGCCCA	.	PASS	SVTYPE=BND;MATEID=r_253_0;SVINSLEN=40;SVINSSEQ=GTCATTTTTTTTGCCATCTTCTTTATAAACACCCCAGCCC	TR:VR	265:74	42:0
chr5	36726570	r_303_0	A	A]chr5:36726777]	.	PASS	SVTYPE=BND;MATEID=r_303_1	TR:VR	63:8	19:0
chr5	36726777	r_303_1	A	A]chr5:36726570]	.	PASS	SVTYPE=BND;MATEID=r_303_0	TR:VR	63:8	19:0
chr6	37911654	r_349_0	C	C[chr9:115059184[	.	PASS	SVTYPE=BND;MATEID=r_349_1	TR:VR	99:21	57:0
chr9	115059184	r_349_1	C	]chr6:37911654]C	.	PASS	SVTYPE=BND;MATEID=r_349_0	TR:VR	99:21	57:0
chr6	62840290	r_402_0	G	[chr6:64802985[GC	.	PASS	SVTYPE=BND;MATEID=r_402_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	111:16	50:0
chr6	64802985	r_402_1	C	[chr6:62840290[CC	.	PASS	SVTYPE=BND;MATEID=r_402_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	111:16	50:0
chr8	137881433	r_472_0	T	[chr8:140297025[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_472_1	TR:VR	186:6	51:0
chr8	140297025	r_472_1	C	[chr8:137881433[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_472_0	TR:VR	186:6	51:0
chrX	93822906	r_527_0	T	T]chrX:94312169]	.	PASS	SVTYPE=BND;MATEID=r_527_1	TR:VR	57:18	55:0
chrX	94312169	r_527_1	T	T]chrX:93822906]	.	PASS	SVTYPE=BND;MATEID=r_527_0	TR:VR	57:18	55:0
chr19	36205697	d_1123	G	<DEL>	.	PASS	END=36206001;SVTYPE=DEL;SVLEN=-304	TR:VR	88:36	20:0
chr20	46616764	r_254_0	A	A]chr20:54878222]	.	PASS	SVTYPE=BND;MATEID=r_254_1	TR:VR	407:76	57:0
chr20	54878222	r_254_1	T	T]chr20:46616764]	.	PASS	SVTYPE=BND;MATEID=r_254_0	TR:VR	407:76	57:0
chr5	37470192	r_304_0	C	CGAGCATCTTCGCATGTCGGCA]chr5:100391906]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_304_1;SVINSLEN=21;SVINSSEQ=GAGCATCTTCGCATGTCGGCA	TR:VR	68:3	36:0
chr5	100391906	r_304_1	A	ATGCCGACATGCGAAGATGCTC]chr5:37470192]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_304_0;SVINSLEN=21;SVINSSEQ=TGCCGACATGCGAAGATGCTC	TR:VR	68:3	36:0
chr5	69006974	r_309	G	<DUP>	.	PASS	END=143889905;SVTYPE=DUP;SVLEN=74882931	TR:VR	99:8	66:0
chr6	37918723	r_350_0	A	A[chrX:80155073[	.	PASS	SVTYPE=BND;MATEID=r_350_1	TR:VR	75:19	54:0
chrX	80155073	r_350_1	T	]chr6:37918723]T	.	PASS	SVTYPE=BND;MATEID=r_350_0	TR:VR	75:19	54:0
chr6	62934557	r_403_0	T	T]chrX:155463753]	.	PASS	SVTYPE=BND;MATEID=r_403_1	TR:VR	113:15	63:0
chrX	155463753	r_403_1	A	A]chr6:62934557]	.	PASS	SVTYPE=BND;MATEID=r_403_0	TR:VR	113:15	63:0
chr7	73590182	r_436_0	A	AAAAGA]chr7:78442031]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_436_1;SVINSLEN=5;SVINSSEQ=AAAGA	TR:VR	90:4	39:0
chr7	78442031	r_436_1	G	GTCTTT]chr7:73590182]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_436_0;SVINSLEN=5;SVINSSEQ=TCTTT	TR:VR	90:4	39:0
chr19	36218567	r_193	G	<DUP>	.	PASS	END=40138875;SVTYPE=DUP;SVLEN=3920308	TR:VR	125:20	51:0
chr2	58038630	r_213_0	C	]chr4:61977082]A	.	PASS	SVTYPE=BND;MATEID=r_213_1	TR:VR	81:12	42:0
chr4	61977082	r_213_1	A	A[chr2:58038630[	.	PASS	SVTYPE=BND;MATEID=r_213_0	TR:VR	81:12	42:0
chr5	6991655	r_298	T	<DEL>	.	PASS	END=29166246;SVTYPE=DEL;SVLEN=-22174591;SVINSLEN=1;SVINSSEQ=T	TR:VR	123:11	63:0
chr6	37994617	r_351_0	G	[chr6:61168485[T	.	PASS	SVTYPE=BND;MATEID=r_351_1	TR:VR	112:16	34:0
chr6	61168485	r_351_1	T	[chr6:37994617[T	.	PASS	SVTYPE=BND;MATEID=r_351_0	TR:VR	112:16	34:0
chr6	63092200	r_404_0	T	[chrX:63746370[T	.	PASS	SVTYPE=BND;MATEID=r_404_1	TR:VR	82:25	51:0
chrX	63746370	r_404_1	T	[chr6:63092200[T	.	PASS	SVTYPE=BND;MATEID=r_404_0	TR:VR	82:25	51:0
chr8	32752555	r_445_0	T	[chr8:32754043[A	.	PASS	SVTYPE=BND;MATEID=r_445_1	TR:VR	68:53	24:0
chr8	32754043	r_445_1	A	[chr8:32752555[A	.	PASS	SVTYPE=BND;MATEID=r_445_0	TR:VR	68:53	24:0
chr2	58659995	r_214_0	A	[chr2:152097939[A	.	PASS	SVTYPE=BND;MATEID=r_214_1	TR:VR	78:6	51:0
chr2	152097939	r_214_1	A	[chr2:58659995[A	.	PASS	SVTYPE=BND;MATEID=r_214_0	TR:VR	78:6	51:0
chr2	90398325	i_777	A	<INS>	.	Too_low_VAF	END=90398325;SVTYPE=INS;SVINSLEN=1455;SVINSSEQ=ATCATCATCGAATGGAATCACCAAATTGAATCGAATGGAATGATCATCAAAGACAATCGAAGGGAAACATCGAATGGGAATGAACGGAGTCATCGAATGGAATCGATAGGAATCATCGAATGGATTCAAATGGAATCGTCATCGAATGGAAACGAACGGAATCATCGATTGGACACGAATGGAATCATCATCAAATAGAATTGAATGGAATCATCGAATGGCATCGAATGGAATCATCTTCGAATAAAATCAAATGGAATAATCGAATGTACTCGAATGGAATCATCAAATGAATTTGAGAGGAATCATCATCGAATGGAATTGAATAGAATCATCGAATGGACTCGAATGGAATCATTGAATGGAATCGAATGGAATCATTGAATGGAGTCGAATGGAACCATCATTGAATGGAATCTAACAAATGGAATCAAATGGAATCATCATCAAATGAAATCAAATGGAATCATCAAATGGAATCGAATGGAATCATCATTGAATGGAATCGAATAGAATCTTTGAATGAAATTGAATGGAATCAGCATGAAATGGAATCTAAAGGAATCATAGAATGGTATCGAATGGAATCATCATCAAATGGAATGGAATGGAATGGAATGGAATGGAATCAATCATCGAATGGAATCAAAAGCAATCATTCAATGGACTCTAATAGAATCAGCGAATGGACTTGAATGTAATCATCATCGAATGGAGAAGAATGGAATCATCGAATGGACACGAATGGAATCATCATCAAATGGAATCGAATGGAATCATATAATGAACCCGAATGGAATCAAAATTGAATGGAATAGAATGGAATCATCATCAAATGGAATCGAATGGAATCATCATCAAATGGAATCGAATGGAATCATCAAATGGATTCGAATGGAGTCATTGTCTAATGCAATCGAAAGAAATCATAGAATAGAATCCCATGGAATCAACATCAAATGGAATCGATTGGAATCATTATCAAATGGAATTGAATGGAATCACTGAATGGAATCATCATCAAATAGAATCGAACGGAATCATCGAATTGACTCTAATGGAATCATCACTGAATGGAATAGAATGGAATAATCAAATGGAAACGAATGGAATCATCATCGAATGGAATCGAATGGTATCATCAAATGCACTTGAATGGAATCATCAATGAATGGAATCGAATGGTATAATCGAATGGAATCAAATGGAATCATCTTCGAGTGGAACTTAAAGGAATCATCAAATGGACTCCAATGGAATAATCATCGTATGGAATCAAATGGAATCATCGAATGTACTCGAATGGAATCATCGAATGTACTCGAATGGAATCATCGAATGGAATCGAATGGAATCAACATCGAACGGAAAAGAAGGGAATCATCAAGTGGACACGAATGGAATCAACATCTAATGGAATGGAATGGAATCATCAAATGGAATGGAATGGAATCA	TR:VR	424:8	269:1
chr3	95553591	r_279_0	A	[chr3:95554861[A	.	PASS	SVTYPE=BND;MATEID=r_279_1	TR:VR	66:18	33:0
chr3	95554861	r_279_1	A	[chr3:95553591[A	.	PASS	SVTYPE=BND;MATEID=r_279_0	TR:VR	66:18	33:0
chr5	73592129	i_1296	C	<INS>	.	PASS	END=73592173;SVTYPE=INS;SVINSLEN=86;SVINSSEQ=CAGGAGGGTACCTATCCTTCTCCTCTTTACCTCTATGAAATAAACTTTTTTGGCTTGACATATGAGTGAGAACATGCAATATGTTT	TR:VR	44:5	31:0
chr6	39498069	r_352	C	<DEL>	.	PASS	END=57250450;SVTYPE=DEL;SVLEN=-17752381	TR:VR	119:21	57:0
chr6	63350249	r_405	A	<DEL>	.	PASS	END=64198313;SVTYPE=DEL;SVLEN=-848064	TR:VR	146:28	67:0
chr10	1818896	r_43_0	T	T[chrX:18297956[	.	PASS	SVTYPE=BND;MATEID=r_43_1	TR:VR	111:12	65:0
chrX	18297956	r_43_1	C	]chr10:1818896]C	.	PASS	SVTYPE=BND;MATEID=r_43_0	TR:VR	111:12	65:0
chr17_KI270730v1_random	91518	d_1071	A	<INS>	.	Too_low_VAF	END=91549;SVTYPE=INS;SVINSLEN=61;SVINSSEQ=ACGGAATGGTATGGATTGTTATGGAATGGAATGCAATGGAGTGGAATGGAGTGCTGTGGGG	TR:VR	228:3	122:1
chr19	37007294	r_194_0	G	[chr21:19334524[C	.	PASS	SVTYPE=BND;MATEID=r_194_1	TR:VR	78:33	56:0
chr21	19334524	r_194_1	C	[chr19:37007294[C	.	PASS	SVTYPE=BND;MATEID=r_194_0	TR:VR	78:33	56:0
chr2	59213477	r_215_0	T	[chr4:104493007[A	.	PASS	SVTYPE=BND;MATEID=r_215_1	TR:VR	87:9	81:0
chr4	104493007	r_215_1	A	[chr2:59213477[A	.	PASS	SVTYPE=BND;MATEID=r_215_0	TR:VR	87:9	81:0
chr20	23714966	r_233_0	T	T]chr20:23724259]	.	PASS	SVTYPE=BND;MATEID=r_233_1	TR:VR	65:18	41:0
chr20	23724259	r_233_1	T	T]chr20:23714966]	.	PASS	SVTYPE=BND;MATEID=r_233_0	TR:VR	65:18	41:0
chr20	47044147	r_255	T	<DEL>	.	Too_low_VAF	END=48343285;SVTYPE=DEL;SVLEN=-1299138	TR:VR	367:10	55:0
chr6	39637682	r_353_0	A	[chrX:69592642[A	.	PASS	SVTYPE=BND;MATEID=r_353_1	TR:VR	86:25	61:0
chrX	69592642	r_353_1	A	[chr6:39637682[A	.	PASS	SVTYPE=BND;MATEID=r_353_0	TR:VR	86:25	61:0
chr6	63483132	r_406_0	G	]chrX:85077147]TT	.	PASS	SVTYPE=BND;MATEID=r_406_1;SVINSLEN=1;SVINSSEQ=T	TR:VR	99:24	43:0
chrX	85077147	r_406_1	T	TA[chr6:63483132[	.	PASS	SVTYPE=BND;MATEID=r_406_0;SVINSLEN=1;SVINSSEQ=A	TR:VR	99:24	43:0
chr1	119589299	d_42	T	<DEL>	.	Too_small_size	END=119589337;SVTYPE=DEL;SVLEN=-38	TR:VR	22:14	33:0
chr10	18660525	d_368	A	<DEL>	.	Too_small_size	END=18660564;SVTYPE=DEL;SVLEN=-39	TR:VR	87:14	19:0
chr10	737870	d_349	G	<DEL>	.	Too_low_VAF	END=737925;SVTYPE=DEL;SVLEN=-55;SVINSLEN=31;SVINSSEQ=AGGCTCAGACCCGGGACAGAGTGAGGCTCCA	TR:VR	81:4	35:1
chr19	40100337	r_195_0	C	CC]chr19:40493821]	.	PASS	SVTYPE=BND;MATEID=r_195_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	113:33	49:0
chr19	40493821	r_195_1	A	AG]chr19:40100337]	.	PASS	SVTYPE=BND;MATEID=r_195_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	113:33	49:0
chr2	60091433	r_216_0	T	[chr2:61493882[AAATAGAGGATGAGTGACTCATGACTTTCCAAC	.	PASS	SVTYPE=BND;MATEID=r_216_1;SVINSLEN=32;SVINSSEQ=AAATAGAGGATGAGTGACTCATGACTTTCCAA	TR:VR	128:8	55:0
chr2	61493882	r_216_1	C	[chr2:60091433[TTGGAAAGTCATGAGTCACTCATCCTCTATTTC	.	PASS	SVTYPE=BND;MATEID=r_216_0;SVINSLEN=32;SVINSSEQ=TTGGAAAGTCATGAGTCACTCATCCTCTATTT	TR:VR	128:8	55:0
chr20	23715217	r_234_0	G	[chr20:23728441[T	.	PASS	SVTYPE=BND;MATEID=r_234_1	TR:VR	70:24	46:0
chr20	23728441	r_234_1	T	[chr20:23715217[T	.	PASS	SVTYPE=BND;MATEID=r_234_0	TR:VR	70:24	46:0
chr6	39767022	r_354_0	A	A[chrX:66297103[	.	PASS	SVTYPE=BND;MATEID=r_354_1	TR:VR	75:20	71:0
chrX	66297103	r_354_1	A	]chr6:39767022]A	.	PASS	SVTYPE=BND;MATEID=r_354_0	TR:VR	75:20	71:0
chr6	63932405	r_407_0	A	[chrX:68450635[G	.	PASS	SVTYPE=BND;MATEID=r_407_1	TR:VR	104:29	39:0
chrX	68450635	r_407_1	G	[chr6:63932405[G	.	PASS	SVTYPE=BND;MATEID=r_407_0	TR:VR	104:29	39:0
chr7	79287034	r_437_0	C	[chr7:79287444[G	.	PASS	SVTYPE=BND;MATEID=r_437_1	TR:VR	51:9	22:0
chr7	79287444	r_437_1	G	[chr7:79287034[G	.	PASS	SVTYPE=BND;MATEID=r_437_0	TR:VR	51:9	22:0
chrUn_KI270757v1	39931	i_1625	G	<INS>	.	PASS	END=39931;SVTYPE=INS;SVINSLEN=171;SVINSSEQ=AAGCAATCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCAAAGAGTTGAAACTTCCTTTTGATGTACCAGTTTTGAAATACTCTTTTTGTAGAATCTGCAAGAGGACATTTGGAACGCATTGGGGCCTATGGTAGAAAAGGACACATCTTCATTTAAAATCTAGACAA	TR:VR	91:8	70:1
chrX	1588907	i_1651	C	<INS>	.	Too_low_VAF	END=1588907;SVTYPE=INS;SVINSLEN=346;SVINSSEQ=TCCTCTCTCCTCCCCTTCTCCTCTCTCCCCTCCTTTCTCCCCTCCTTCTCCTCCTCTCCCCTCCTCCCCTCCCCTCTTCCTCTCCCCCCCTTCCCTCTCCCTCCCCTTCTCTCCCCTCTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCTCTCTCTCTTCCTCTCTCTCTCTCTCTCTTCTCCTCTTCTCTCTCCTCTCTCTCTCTGCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TR:VR	264:3	155:1
chr1	2698945	d_33	T	<DEL>	.	PASS	END=2699041;SVTYPE=DEL;SVLEN=-96;SVINSLEN=15;SVINSSEQ=GACAGTCTGGAGCAG	TR:VR	110:12	58:1
chr10	1966756	r_44_0	C	[chr12:90579659[A	.	PASS	SVTYPE=BND;MATEID=r_44_1	TR:VR	127:11	66:0
chr12	90579659	r_44_1	A	[chr10:1966756[A	.	PASS	SVTYPE=BND;MATEID=r_44_0	TR:VR	127:11	66:0
chr19	40138318	r_196_0	G	[chr19:40143514[T	.	PASS	SVTYPE=BND;MATEID=r_196_1	TR:VR	82:35	34:0
chr19	40143514	r_196_1	T	[chr19:40138318[T	.	PASS	SVTYPE=BND;MATEID=r_196_0	TR:VR	82:35	34:0
chr20	23794652	d_1304	A	<DEL>	.	PASS	END=23795790;SVTYPE=DEL;SVLEN=-1138	TR:VR	44:17	32:0
chr20	47834420	i_896	G	<INS>	.	Too_low_VAF	END=47834421;SVTYPE=INS;SVINSLEN=149;SVINSSEQ=GGTCTCCAGCTTCCTGACCTTCGAATTACAACAAAATTGCTCCTACCTGGTTTGGCAGCTCCACGACCCTGAAACTAGAACAAGACCTCTCCTCCCTGGGTCGCCAGCTTTCTGACCCTCGAACTACAGCAATGTTGCTTCTGCCTGGG	TR:VR	175:3	23:0
chr22	20163676	d_1514	A	<INS>	.	Too_low_VAF	END=20163659;SVTYPE=INS;SVINSLEN=459;SVINSSEQ=TCACCACCACCATCACTACCATCACCATCACTACCACCATCACCACTATCATTACTATCATCACCACCATCACCACAACCATCATCATCACCATCATCATTACCACCACCACAAATACCACCATCACTATCACCATCACCACCATCACTACCACCAGGACCATCATCACCACCATAATCATCATCACATCATCACCATCACCACCATCACATCACCCCACCACCACTACCACCATTACCATAACCATTACCATCACTACCACCACCACCACTATCGCCATCATCACCACTTTCATCATCATCATCATCATCATCTTCTTCACCACCATAACCACCACCACCATCACCACCATAACTGTCACTCCCCACCTTCATTTTTCTTGATAACACTTCCACCACCTGACAGCAGAGAAAATCCAGTCGCCACATGAATGCTCACTACCACCACCACCACTACCAC	TR:VR	134:5	105:0
chr7	79287468	d_1843	A	<DEL>	.	PASS	END=79287838;SVTYPE=DEL;SVLEN=-370	TR:VR	51:9	22:0
chr8	139982054	r_473_0	G	G]chr8:143241873]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_473_1	TR:VR	187:7	51:0
chr8	143241873	r_473_1	T	T]chr8:139982054]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_473_0	TR:VR	187:7	51:0
chr8	34808197	r_446_0	G	G]chr8:34808796]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_446_1	TR:VR	120:3	32:0
chr8	34808796	r_446_1	A	A]chr8:34808197]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_446_0	TR:VR	120:3	32:0
chr16	857486	i_433	C	<INS>	.	PASS	END=857486;SVTYPE=INS;SVINSLEN=72;SVINSSEQ=GGGACGGGTGTGGAGTGGTGTCTCGGGGACGGGGTGTGAGTGGTGTCACGGGACGGGTGTGAGTGGTGTCAC	TR:VR	44:5	24:0
chr2	61493379	r_218	T	<DEL>	.	PASS	END=61675693;SVTYPE=DEL;SVLEN=-182314	TR:VR	107:8	49:0
chr6	170589294	r_432_0	C	[chrX:132447735[A	.	PASS	SVTYPE=BND;MATEID=r_432_1	TR:VR	98:26	62:0
chrX	132447735	r_432_1	A	[chr6:170589294[A	.	PASS	SVTYPE=BND;MATEID=r_432_0	TR:VR	98:26	62:0
chr8	36999125	r_447_0	A	A]chr9:251489]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_447_1	TR:VR	135:3	49:0
chr9	251489	r_447_1	T	T]chr8:36999125]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_447_0	TR:VR	135:3	49:0
chr10	21017946	r_45	G	<DUP>	.	PASS	END=25700134;SVTYPE=DUP;SVLEN=4682188	TR:VR	157:20	60:0
chr17	82976464	d_1045	G	<INS>	.	PASS	END=82976507;SVTYPE=INS;SVINSLEN=43;SVINSSEQ=ACAGAGCCGGATTCCATCCTCCCAGGGGCCGGAGGCCACTTAT	TR:VR	75:4	22:0
chr19	9461229	r_182_0	T	]chr3:198174527]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_182_1	TR:VR	283:11	365:0
chr3	198174527	r_182_1	T	T[chr19:9461229[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_182_0	TR:VR	283:11	365:0
chr2	61494171	d_1169	G	<DEL>	.	PASS	END=61494328;SVTYPE=DEL;SVLEN=-157	TR:VR	67:8	31:0
chr2	91418772	d_1246	G	<DEL>	.	Too_low_VAF	END=91419003;SVTYPE=DEL;SVLEN=-231;SVINSLEN=88;SVINSSEQ=TTGTCTGCATTCGGTTCCATTCTATGATGATTCCTATGGACTCCATTCCATGACTCCATTCGATTCCATTCATTGATGTTTCCAATCC	TR:VR	88:3	48:1
chr4	105583287	d_1650	T	<DEL>	.	Too_small_size	END=105583333;SVTYPE=DEL;SVLEN=-46	TR:VR	60:11	30:0
chr5	82466133	i_1299	G	<INS>	.	PASS	END=82466137;SVTYPE=INS;SVINSLEN=229;SVINSSEQ=TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATATATTATATATTATATAATATATTATTATATTATATATAATATAATATAATATAATATAATATATAATATATTATTATATATTATATAATATATTATAATATATTATTATATATTATATAATATATTATATTATATAATATATAATATATTATTATATTAATATATT	TR:VR	44:3	31:0
chr6	170616901	r_433_0	T	T]chrX:113737702]	.	PASS	SVTYPE=BND;MATEID=r_433_1	TR:VR	63:24	51:0
chrX	113737702	r_433_1	C	C]chr6:170616901]	.	PASS	SVTYPE=BND;MATEID=r_433_0	TR:VR	63:24	51:0
chr6	40436616	r_355_0	C	]chr7:130825834]T	.	PASS	SVTYPE=BND;MATEID=r_355_1	TR:VR	75:25	55:0
chr7	130825834	r_355_1	T	T[chr6:40436616[	.	PASS	SVTYPE=BND;MATEID=r_355_0	TR:VR	75:25	55:0
chr7	80396983	r_438_0	G	G]chr7:80399871]	.	PASS	SVTYPE=BND;MATEID=r_438_1	TR:VR	34:3	24:0
chr7	80399871	r_438_1	T	T]chr7:80396983]	.	PASS	SVTYPE=BND;MATEID=r_438_0	TR:VR	34:3	24:0
chr10	21971123	r_46	C	<DUP>	.	PASS	END=22013176;SVTYPE=DUP;SVLEN=42053	TR:VR	224:18	50:0
chr10	78394757	r_72_0	G	]chr20:49299964]G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_72_1	TR:VR	301:14	64:0
chr20	49299964	r_72_1	G	G[chr10:78394757[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_72_0	TR:VR	301:14	64:0
chr2	61503756	r_219_0	A	A]chrX:80336139]	.	PASS	SVTYPE=BND;MATEID=r_219_1	TR:VR	114:7	51:0
chrX	80336139	r_219_1	A	A]chr2:61503756]	.	PASS	SVTYPE=BND;MATEID=r_219_0	TR:VR	114:7	51:0
chr6	4138176	d_1776	A	<DEL>	.	PASS	END=4138425;SVTYPE=DEL;SVLEN=-249	TR:VR	33:6	33:0
chr6	64369425	r_408_0	G	G]chrX:117869264]	.	PASS	SVTYPE=BND;MATEID=r_408_1	TR:VR	90:17	64:0
chrX	117869264	r_408_1	A	A]chr6:64369425]	.	PASS	SVTYPE=BND;MATEID=r_408_0	TR:VR	90:17	64:0
chr1	2436603	r_1	C	<DEL>	.	Too_low_VAF	END=231800034;SVTYPE=DEL;SVLEN=-229363431;SVINSLEN=246;SVINSSEQ=CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTCCTTCCCTCCCTCCCTCCGTCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCTCCCTTCCTCCCTCACTCCCTTCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAGTG	TR:VR	160:7	69:1
chr10	21975287	r_47	T	<DEL>	.	PASS	END=21976949;SVTYPE=DEL;SVLEN=-1662	TR:VR	148:16	20:0
chr10	78394760	r_73_0	T	T]chr4:141534878]	.	PASS	SVTYPE=BND;MATEID=r_73_1	TR:VR	92:6	64:0
chr4	141534878	r_73_1	A	A]chr10:78394760]	.	PASS	SVTYPE=BND;MATEID=r_73_0	TR:VR	92:6	64:0
chr19	44457413	i_643	A	<INS>	.	PASS	END=44457413;SVTYPE=INS;SVINSLEN=149;SVINSSEQ=GGAGAGTTACTGAGGGTTGGAGATAAAGACGTGCTAGAGACTGAGGAGTAACTGAGTGAAATTGGTGAGTTTGGTGGTGATTCCGAGAGTGCCTGGAACTGACTCCAGCTGCAATGTGGGCGTGGTTGGAGAGTAGCTGGGACAGATGG	TR:VR	37:3	26:0
chr4	60305571	r_290_0	A	[chrX:109507417[A	.	PASS	SVTYPE=BND;MATEID=r_290_1	TR:VR	106:17	58:0
chrX	109507417	r_290_1	A	[chr4:60305571[A	.	PASS	SVTYPE=BND;MATEID=r_290_0	TR:VR	106:17	58:0
chr6	43059610	r_356_0	T	TA]chrX:62531928]	.	PASS	SVTYPE=BND;MATEID=r_356_1;SVINSLEN=1;SVINSSEQ=A	TR:VR	67:15	46:0
chrX	62531928	r_356_1	C	CT]chr6:43059610]	.	PASS	SVTYPE=BND;MATEID=r_356_0;SVINSLEN=1;SVINSSEQ=T	TR:VR	67:15	46:0
chr6	64395566	r_409_0	G	]chr9:94263322]A	.	PASS	SVTYPE=BND;MATEID=r_409_1	TR:VR	76:24	53:0
chr9	94263322	r_409_1	A	A[chr6:64395566[	.	PASS	SVTYPE=BND;MATEID=r_409_0	TR:VR	76:24	53:0
chr7	84135201	d_1845	C	<DEL>	.	PASS	END=84135465;SVTYPE=DEL;SVLEN=-264	TR:VR	27:14	27:0
chr12	101484139	r_92_0	G	[chr17:27211243[GCGTTTAGTCCGGCATTCTCCTTTACACTCC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_92_1;SVINSLEN=30;SVINSSEQ=GCGTTTAGTCCGGCATTCTCCTTTACACTC	TR:VR	96:3	53:0
chr17	27211243	r_92_1	C	[chr12:101484139[GAGTGTAAAGGAGAATGCCGGACTAAACGCC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_92_0;SVINSLEN=30;SVINSSEQ=GAGTGTAAAGGAGAATGCCGGACTAAACGC	TR:VR	96:3	53:0
chr15	17072195	d_906	T	<DEL>	.	PASS	END=17072477;SVTYPE=DEL;SVLEN=-282;SVINSLEN=108;SVINSSEQ=CAACTCTGTGTGATGAATGCACACATTACAAAGAAGTTTCTTAGAATGCTTTTGTCTAGTTTTTATATGAAGATATTTATCTCACAATAGGCCTCAAATGGCTCAGAA	TR:VR	40:8	45:0
chr19	13170548	i_613	C	<INS>	.	PASS	END=13170548;SVTYPE=INS;SVINSLEN=66;SVINSSEQ=TTCCCACCTCACCCTCCTGAGTAGCAGGGACTACAGATGTGGGCCACCATGGTCAGCTAATTTAAT	TR:VR	53:21	32:0
chr19	46570563	r_197_0	A	[chr20:51318849[A	.	PASS	SVTYPE=BND;MATEID=r_197_1	TR:VR	243:35	61:0
chr20	51318849	r_197_1	A	[chr19:46570563[A	.	PASS	SVTYPE=BND;MATEID=r_197_0	TR:VR	243:35	61:0
chr2	63348296	r_220_0	A	[chr2:63348736[G	.	PASS	SVTYPE=BND;MATEID=r_220_1	TR:VR	65:7	34:0
chr2	63348736	r_220_1	G	[chr2:63348296[G	.	PASS	SVTYPE=BND;MATEID=r_220_0	TR:VR	65:7	34:0
chr20	48478906	r_256_0	T	T]chr21:10464366]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_256_1	TR:VR	491:3	184:0
chr21	10464366	r_256_1	C	C]chr20:48478906]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_256_0	TR:VR	491:3	184:0
chr4	60894247	r_291_0	G	G[chrX:79567914[	.	PASS	SVTYPE=BND;MATEID=r_291_1	TR:VR	73:11	47:0
chrX	79567914	r_291_1	A	]chr4:60894247]A	.	PASS	SVTYPE=BND;MATEID=r_291_0	TR:VR	73:11	47:0
chr6	21128402	r_324	T	<DEL>	.	Too_low_VAF	END=21155556;SVTYPE=DEL;SVLEN=-27154;SVINSLEN=5;SVINSSEQ=GAAAG	TR:VR	109:4	47:0
chr6	43239563	r_357_0	T	[chrX:67502333[T	.	PASS	SVTYPE=BND;MATEID=r_357_1	TR:VR	82:32	54:0
chrX	67502333	r_357_1	T	[chr6:43239563[T	.	PASS	SVTYPE=BND;MATEID=r_357_0	TR:VR	82:32	54:0
chr6	64543542	r_410_0	G	]chrX:63861618]T	.	PASS	SVTYPE=BND;MATEID=r_410_1	TR:VR	101:23	63:0
chrX	63861618	r_410_1	T	T[chr6:64543542[	.	PASS	SVTYPE=BND;MATEID=r_410_0	TR:VR	101:23	63:0
chrUn_KI270442v1	22295	r_493_0	A	]chrY:26673198]AAAGGGAATCAAATCTAG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_493_1;SVINSLEN=17;SVINSSEQ=AAAGGGAATCAAATCTA	TR:VR	101:4	61:0
chrY	26673198	r_493_1	G	GTAGATTTGATTCCCTTT[chrUn_KI270442v1:22295[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_493_0;SVINSLEN=17;SVINSSEQ=TAGATTTGATTCCCTTT	TR:VR	101:4	61:0
chr1	143497142	i_68	T	<INS>	.	Too_low_VAF	END=143497143;SVTYPE=INS;SVINSLEN=401;SVINSSEQ=TTGCACCCCCCGCCGCCGCGGCACGCCCCCCGCCGCCGCGGCTTTTGCCCCGCCCCGCCTCGGCTTGTTGCCCGCCGCCGCGGCTTTTGCCCGCCACAGCTTGTTGCCCGCCGCGGCTTTTGCCCCCCCGCCGCCGCGGCTTTTTGCCCGCCAGCCGGCTTTTTACCCCCCGCCGCCGCGGCCTGCCCCGCGGCGGCTTTTTCCCGCCCGCTACGGCCCCCCCCCAACCCCGCCTCGGCTTTCTGCCACCCACCCGCCGCCGCGGCACGCCCCTCCGCCGCCGCGGCTTTTTGCCCCCACGCTGCCGCGGCTTTTTGCCCGCCGCCGGCTTTTGCCCCCGCCTTTTTGCCGCGACGCTTTTGTCCCGCCGCCGCCGCGGCGCACCCCCAGCCGCTGCGGCT	TR:VR	114:4	71:0
chr10	21976859	r_48_0	C	[chr10:22013188[C	.	PASS	SVTYPE=BND;MATEID=r_48_1	TR:VR	228:42	45:0
chr10	22013188	r_48_1	C	[chr10:21976859[C	.	PASS	SVTYPE=BND;MATEID=r_48_0	TR:VR	228:42	45:0
chr15	20293174	r_131_0	T	[chr7:148373053[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_131_1	TR:VR	109:3	85:0
chr7	148373053	r_131_1	T	[chr15:20293174[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_131_0	TR:VR	109:3	85:0
chr19	13170612	i_614	A	<INS>	.	PASS	END=13170612;SVTYPE=INS;SVINSLEN=65;SVINSSEQ=ATTCCCACCTCACCCTCCTGAGTAGCAGGGACTACAGATGTGGGCCACCATGGTCAGCTAATTTA	TR:VR	53:22	32:0
chr19	48315728	r_198_0	A	[chr19:53249331[G	.	PASS	SVTYPE=BND;MATEID=r_198_1	TR:VR	142:23	53:0
chr19	53249331	r_198_1	G	[chr19:48315728[G	.	PASS	SVTYPE=BND;MATEID=r_198_0	TR:VR	142:23	53:0
chr2	63527796	r_221	C	<DEL>	.	PASS	END=63720105;SVTYPE=DEL;SVLEN=-192309	TR:VR	123:10	70:0
chr20	48500590	d_1385	G	<DEL>	.	Too_low_VAF	END=48500885;SVTYPE=DEL;SVLEN=-295;SVINSLEN=258;SVINSSEQ=TTCCCTCAAACTTCAGCTATAGCACTGGCTCTTCCCCGTGGCCACCAGCTCTGCAAACCTCAACTTACACAGTGGTAGCACCAGCTCCTCCCTAGGTCTCCAGCTACACGACCGTCAAAATTGAACTGCAACACCAGCTCCTCTTTGGCCTCCAGCTCCACAATCCTCCAACAACAACAGCAACACCGGCTCCTCCCTGAATCTCCAGCTCAACAACCCTCAGACTTGAGAGGCAGCACCGGCACCTCCCCAAGACTC	TR:VR	266:3	29:0
chr21	5314845	d_1431	C	<DEL>	.	Too_low_VAF	END=5315467;SVTYPE=DEL;SVLEN=-622;SVINSLEN=108;SVINSSEQ=CACCAAAAGAAAGGTTTACCTCTGTGAGATGAATGCAAACATCACAAAGAAGTTTCTCCCATTGCTTCTGTCTAGATTTTATGTGAAGATATTTCCTTTTCTACCATA	TR:VR	177:3	109:0
chr6	43281548	r_358_0	C	C]chr6:61732949]	.	PASS	SVTYPE=BND;MATEID=r_358_1	TR:VR	102:29	39:0
chr6	61732949	r_358_1	T	T]chr6:43281548]	.	PASS	SVTYPE=BND;MATEID=r_358_0	TR:VR	102:29	39:0
chr6	64579997	r_411_0	T	T]chr6:158081511]	.	PASS	SVTYPE=BND;MATEID=r_411_1	TR:VR	87:30	59:0
chr6	158081511	r_411_1	G	G]chr6:64579997]	.	PASS	SVTYPE=BND;MATEID=r_411_0	TR:VR	87:30	59:0
chr8	39659281	r_449	T	<DUP>	.	PASS	END=39663959;SVTYPE=DUP;SVLEN=4678	TR:VR	99:6	37:0
chr10	21979573	r_49_0	G	G]chr10:45149913]	.	PASS	SVTYPE=BND;MATEID=r_49_1	TR:VR	165:41	35:0
chr10	45149913	r_49_1	G	G]chr10:21979573]	.	PASS	SVTYPE=BND;MATEID=r_49_0	TR:VR	165:41	35:0
chr2	63772395	r_222_0	T	T]chr2:63773125]	.	PASS	SVTYPE=BND;MATEID=r_222_1	TR:VR	47:3	38:0
chr2	63773125	r_222_1	A	A]chr2:63772395]	.	PASS	SVTYPE=BND;MATEID=r_222_0	TR:VR	47:3	38:0
chr6	64626189	r_412_0	G	[chrX:113853566[A	.	PASS	SVTYPE=BND;MATEID=r_412_1	TR:VR	83:20	67:0
chrX	113853566	r_412_1	A	[chr6:64626189[A	.	PASS	SVTYPE=BND;MATEID=r_412_0	TR:VR	83:20	67:0
chr7	85293032	r_439	A	<DUP>	.	PASS	END=85668711;SVTYPE=DUP;SVLEN=375679;SVINSLEN=3;SVINSSEQ=ACT	TR:VR	48:5	52:0
chr5	13419020	r_299	C	<DUP>	.	Too_low_VAF	END=15912548;SVTYPE=DUP;SVLEN=2493528	TR:VR	109:4	69:0
chr6	44723341	r_359_0	C	C]chr6:64692044]	.	PASS	SVTYPE=BND;MATEID=r_359_1	TR:VR	95:19	68:0
chr6	64692044	r_359_1	G	G]chr6:44723341]	.	PASS	SVTYPE=BND;MATEID=r_359_0	TR:VR	95:19	68:0
chr6	64744214	r_413_0	C	C]chrX:84042074]	.	PASS	SVTYPE=BND;MATEID=r_413_1	TR:VR	103:14	62:0
chrX	84042074	r_413_1	T	T]chr6:64744214]	.	PASS	SVTYPE=BND;MATEID=r_413_0	TR:VR	103:14	62:0
chrX	100034851	r_528_0	T	T]chrX:132167622]	.	PASS	SVTYPE=BND;MATEID=r_528_1	TR:VR	51:16	65:0
chrX	132167622	r_528_1	A	A]chrX:100034851]	.	PASS	SVTYPE=BND;MATEID=r_528_0	TR:VR	51:16	65:0
chr10	23805074	r_51_0	T	T]chr10:35162883]	.	PASS	SVTYPE=BND;MATEID=r_51_1	TR:VR	181:10	56:0
chr10	35162883	r_51_1	T	T]chr10:23805074]	.	PASS	SVTYPE=BND;MATEID=r_51_0	TR:VR	181:10	56:0
chr14	25210551	r_110_0	T	TCACCCACTTCCCATAGAGCAGTTTTCATACACTGCTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACGGGATATCCTCACATACAAACTAGACAGAAGCATTCTCGGAAACAGCTCTGTGA]chrUn_KI270538v1:63213]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_110_1;SVINSLEN=144;SVINSSEQ=CACCCACTTCCCATAGAGCAGTTTTCATACACTGCTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACGGGATATCCTCACATACAAACTAGACAGAAGCATTCTCGGAAACAGCTCTGTGA	TR:VR	130:3	78:0
chrUn_KI270538v1	63213	r_110_1	A	ATCACAGAGCTGTTTCCGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAAGCAGTGTATGAAAACTGCTCTATGGGAAGTGGGTG]chr14:25210551]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_110_0;SVINSLEN=144;SVINSSEQ=TCACAGAGCTGTTTCCGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAAGCAGTGTATGAAAACTGCTCTATGGGAAGTGGGTG	TR:VR	130:3	78:0
chr6	44989162	r_360_0	A	]chrX:111018902]CTTTGAGTCCTACAGTTGAA	.	PASS	SVTYPE=BND;MATEID=r_360_1;SVINSLEN=19;SVINSSEQ=CTTTGAGTCCTACAGTTGA	TR:VR	83:26	61:0
chrX	111018902	r_360_1	A	ATCAACTGTAGGACTCAAAG[chr6:44989162[	.	PASS	SVTYPE=BND;MATEID=r_360_0;SVINSLEN=19;SVINSSEQ=TCAACTGTAGGACTCAAAG	TR:VR	83:26	61:0
chr6	64778005	r_414_0	A	[chrX:68484604[G	.	PASS	SVTYPE=BND;MATEID=r_414_1	TR:VR	114:16	41:0
chrX	68484604	r_414_1	G	[chr6:64778005[G	.	PASS	SVTYPE=BND;MATEID=r_414_0	TR:VR	114:16	41:0
chr8	39663944	r_450_0	T	T]chr8:39663959]	.	PASS	SVTYPE=BND;MATEID=r_450_1	TR:VR	82:26	31:0
chr8	39663959	r_450_1	T	T]chr8:39663944]	.	PASS	SVTYPE=BND;MATEID=r_450_0	TR:VR	82:26	31:0
chrX	100767844	r_529_0	T	[chrX:100768905[T	.	PASS	SVTYPE=BND;MATEID=r_529_1	TR:VR	44:13	26:0
chrX	100768905	r_529_1	T	[chrX:100767844[T	.	PASS	SVTYPE=BND;MATEID=r_529_0	TR:VR	44:13	26:0
chr1	143539352	i_70	T	<INS>	.	Too_low_VAF	END=143539352;SVTYPE=INS;SVINSLEN=82;SVINSSEQ=CCGTATGAATCCATTCTCTGATTATATTCCATTCGATTCCATTCATTGACGATTCCATTCAATTCCATTCAATGATGATTCT	TR:VR	78:3	47:0
chr10	92377886	r_75_0	A	A]chr8:91066615]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_75_1	TR:VR	172:4	64:1
chr8	91066615	r_75_1	T	T]chr10:92377886]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_75_0	TR:VR	172:4	64:1
chr20	48612048	r_257_0	T	TG]chr20:49131117]	.	PASS	SVTYPE=BND;MATEID=r_257_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	479:56	49:0
chr20	49131117	r_257_1	A	AC]chr20:48612048]	.	PASS	SVTYPE=BND;MATEID=r_257_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	479:56	49:0
chr6	45144632	r_361_0	T	T[chr7:5733232[	.	PASS	SVTYPE=BND;MATEID=r_361_1	TR:VR	60:20	53:0
chr7	5733232	r_361_1	T	]chr6:45144632]T	.	PASS	SVTYPE=BND;MATEID=r_361_0	TR:VR	60:20	53:0
chr6	64788560	r_415_0	T	T[chrX:92167544[	.	PASS	SVTYPE=BND;MATEID=r_415_1	TR:VR	91:17	50:0
chrX	92167544	r_415_1	T	]chr6:64788560]T	.	PASS	SVTYPE=BND;MATEID=r_415_0	TR:VR	91:17	50:0
chrX	100843685	d_2098	C	<DEL>	.	PASS	END=100846201;SVTYPE=DEL;SVLEN=-2516	TR:VR	65:19	39:0
chr10	94531639	r_76_0	C	C[chr4:49901443[	.	PASS	SVTYPE=BND;MATEID=r_76_1	TR:VR	79:6	48:0
chr4	49901443	r_76_1	T	]chr10:94531639]T	.	PASS	SVTYPE=BND;MATEID=r_76_0	TR:VR	79:6	48:0
chr15	50613366	r_133	G	<DUP>	.	PASS	END=50907111;SVTYPE=DUP;SVLEN=293745	TR:VR	59:6	39:0
chr21	7957934	d_1457	C	<INS>	.	Too_low_VAF	END=7957976;SVTYPE=INS;SVINSLEN=101;SVINSSEQ=ATTGCACTCCATTTCATTTGAGTCCATTCCGTTCAACTACATTGCATTCGAGTGCATTCCATTCTATTCTTTTCCTTCCATTCCATTCCATTCCATTGCAT	TR:VR	517:4	346:1
chr22	37555642	d_1519	T	<DEL>	.	PASS	END=37555749;SVTYPE=DEL;SVLEN=-107	TR:VR	21:3	18:0
chr5	1414309	i_1261	C	<INS>	.	PASS	END=1414355;SVTYPE=INS;SVINSLEN=763;SVINSSEQ=TGGGTGGGGGCCAGGAGGGGCAGGGCAGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGGCAGGGCAGGGAAGGCACTGGGTGGGGGGCCTGGAGGGGCAGGGCGGGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGCAGGGAAGGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCTGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCTGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGCCGGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCTGGAGAGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCTGGAGGGGCAGGGCAGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGCAGGGCGGGGGGAAGGCACTGGGTGGGGGGCCGGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGGCCTGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGCCTGGAGGGGCAGGGCGGGGAAGGCACTGGGTGGGGGCCGGGAGGGGCAGGGCAGGGAAGGCACTGGGGTGGGGGCCGGGAGGGGCAGGGCGGGGAAGGCACTG	TR:VR	59:4	23:0
chr6	45144813	r_362_0	A	[chr9:97700263[C	.	PASS	SVTYPE=BND;MATEID=r_362_1	TR:VR	70:20	56:0
chr9	97700263	r_362_1	C	[chr6:45144813[C	.	PASS	SVTYPE=BND;MATEID=r_362_0	TR:VR	70:20	56:0
chr6	65093894	r_416_0	T	[chr6:159431566[A	.	PASS	SVTYPE=BND;MATEID=r_416_1	TR:VR	92:29	65:0
chr6	159431566	r_416_1	A	[chr6:65093894[A	.	PASS	SVTYPE=BND;MATEID=r_416_0	TR:VR	92:29	65:0
chrX	100859686	r_530	A	<DEL>	.	PASS	END=108142861;SVTYPE=DEL;SVLEN=-7283175	TR:VR	90:37	57:0
chr10	955125	i_113	T	<INS>	.	PASS	END=955125;SVTYPE=INS;SVINSLEN=132;SVINSSEQ=CCCATCCACGCTTCCCCAGGACAGCTCCCATCCACGCTTCCCCAGGACAGCTCCCATCCACGCTTCCCCAGGACAGCTCCCATCCACCCTTTCCCCAGGACAGCTCCCATCCACGCTTCCCCCAGGACAGCC	TR:VR	68:6	19:0
chr12	11028447	r_81	A	<DUP>	.	Too_low_VAF	END=11088810;SVTYPE=DUP;SVLEN=60363;SVINSLEN=1;SVINSSEQ=G	TR:VR	148:3	63:0
chr2	2034392	d_1161	C	<DEL>	.	PASS	END=2035209;SVTYPE=DEL;SVLEN=-817;SVINSLEN=84;SVINSSEQ=CCCAACAATCTCCACCCTCCAATGTGGGTGCAGAGAAGAAACTCCCTAACTTCTCCCCAACAATCTCCACCCTCCAATGCGGGT	TR:VR	35:6	25:0
chr2	81613930	d_1173	G	<DEL>	.	PASS	END=81614065;SVTYPE=DEL;SVLEN=-135	TR:VR	32:9	35:0
chr6	2473609	r_318	A	<DUP>	.	Too_low_VAF	END=2505654;SVTYPE=DUP;SVLEN=32045	TR:VR	63:3	52:0
chr6	45147516	r_363_0	T	[chrX:88297394[A	.	PASS	SVTYPE=BND;MATEID=r_363_1	TR:VR	85:18	73:0
chrX	88297394	r_363_1	A	[chr6:45147516[A	.	PASS	SVTYPE=BND;MATEID=r_363_0	TR:VR	85:18	73:0
chr6	65102958	r_417_0	G	G]chrX:85856723]	.	PASS	SVTYPE=BND;MATEID=r_417_1	TR:VR	108:32	54:0
chrX	85856723	r_417_1	A	A]chr6:65102958]	.	PASS	SVTYPE=BND;MATEID=r_417_0	TR:VR	108:32	54:0
chr1	44796587	i_31	T	<INS>	.	PASS	END=44796596;SVTYPE=INS;SVINSLEN=222;SVINSSEQ=ATAAATATATAAATATATAAATATATATAAATATATATAAATATATATAGATATATAAATATATATATATATATAAATATATATATAGTTATATATATATAATCATATATAAATATATATAAGATATATAGAAATATATATATATATATATATGAAAATATATAAATATATAAATATATATATATATATATAAATATATATAAATATATCTATGTATATAAA	TR:VR	50:10	21:0
chr15	55283578	r_134	C	<DEL>	.	PASS	END=55445573;SVTYPE=DEL;SVLEN=-161995;SVINSLEN=6;SVINSSEQ=TCCTCG	TR:VR	55:10	49:0
chr17	31025860	r_153	C	<DEL>	.	PASS	END=31203723;SVTYPE=DEL;SVLEN=-177863	TR:VR	35:18	56:0
chr19	19075181	r_183_0	C	C]chr19:19092648]	.	PASS	SVTYPE=BND;MATEID=r_183_1	TR:VR	123:23	38:0
chr19	19092648	r_183_1	A	A]chr19:19075181]	.	PASS	SVTYPE=BND;MATEID=r_183_0	TR:VR	123:23	38:0
chr2	81944614	d_1174	A	<DEL>	.	PASS	END=81953662;SVTYPE=DEL;SVLEN=-9048	TR:VR	53:13	28:0
chr20	49130624	r_258_0	A	[chr20:49131111[A	.	PASS	SVTYPE=BND;MATEID=r_258_1	TR:VR	278:58	26:0
chr20	49131111	r_258_1	A	[chr20:49130624[A	.	PASS	SVTYPE=BND;MATEID=r_258_0	TR:VR	278:58	26:0
chr4	21358842	r_285	A	<DUP>	.	PASS	END=21708930;SVTYPE=DUP;SVLEN=350088	TR:VR	91:9	44:0
chr5	144951450	r_314_0	T	TTTTTTTTTTTT[chr6:113605763[	.	PASS	SVTYPE=BND;MATEID=r_314_1;SVINSLEN=11;SVINSSEQ=TTTTTTTTTTT	TR:VR	76:4	67:1
chr6	113605763	r_314_1	T	]chr5:144951450]AAAAAAAAAAAT	.	PASS	SVTYPE=BND;MATEID=r_314_0;SVINSLEN=11;SVINSSEQ=AAAAAAAAAAA	TR:VR	76:4	67:1
chr6	108577191	r_424	A	<DEL>	.	PASS	END=108818801;SVTYPE=DEL;SVLEN=-241610	TR:VR	45:24	58:0
chr6	2502570	r_319_0	C	C]chrX:65913135]	.	PASS	SVTYPE=BND;MATEID=r_319_1	TR:VR	49:7	67:0
chrX	65913135	r_319_1	C	C]chr6:2502570]	.	PASS	SVTYPE=BND;MATEID=r_319_0	TR:VR	49:7	67:0
chr6	45147522	r_364	A	<DEL>	.	PASS	END=56593262;SVTYPE=DEL;SVLEN=-11445740	TR:VR	102:20	60:0
chr6	65120414	r_418_0	G	[chrX:85036946[A	.	PASS	SVTYPE=BND;MATEID=r_418_1	TR:VR	68:24	53:0
chrX	85036946	r_418_1	A	[chr6:65120414[A	.	PASS	SVTYPE=BND;MATEID=r_418_0	TR:VR	68:24	53:0
chrX	105930754	r_531	G	<DUP>	.	PASS	END=134387729;SVTYPE=DUP;SVLEN=28456975	TR:VR	45:14	53:0
chr1	125150317	i_46	C	<INS>	.	Too_low_VAF	END=125150317;SVTYPE=INS;SVINSLEN=180;SVINSSEQ=AATGATGATTCCATTCGAGTCCTTTGAATGATTGCATTGAAGTCCATTTGATGATTCCTTTCAATTCCATTCAAGGATGATTCCATATGACTCCATTCGACGATGATTCCATGCGATTCCGTTCGATGATGACTCCTTTTGGTTCCATTCGATGACGATTCCATTTGGTTCCATTCGATG	TR:VR	118:3	45:0
chr1	46241185	r_4_0	C	]chr3:126371359]CGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGTAGGGAGGTAGGGGGGTCAGCCCCCCGCCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_4_1;SVINSLEN=226;SVINSSEQ=CGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGTAGGGAGGTAGGGGGGTCAGCCCCCCGCCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTC	TR:VR	96:4	58:1
chr3	126371359	r_4_1	T	TGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGGCGGGGGGCTGACCCCCCTACCTCCCTACCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCG[chr1:46241185[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_4_0;SVINSLEN=226;SVINSSEQ=GACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGGCGGGGGGCTGACCCCCCTACCTCCCTACCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCG	TR:VR	96:4	58:1
chr17	35794649	r_154_0	A	[chr21:18322897[G	.	PASS	SVTYPE=BND;MATEID=r_154_1	TR:VR	64:25	54:0
chr21	18322897	r_154_1	G	[chr17:35794649[G	.	PASS	SVTYPE=BND;MATEID=r_154_0	TR:VR	64:25	54:0
chr5	1465508	d_1716	C	<DEL>	.	PASS	END=1465561;SVTYPE=DEL;SVLEN=-53;SVINSLEN=1;SVINSSEQ=A	TR:VR	63:15	37:0
chr6	2580439	r_320_0	G	]chrX:63440130]A	.	PASS	SVTYPE=BND;MATEID=r_320_1	TR:VR	55:15	53:0
chrX	63440130	r_320_1	A	A[chr6:2580439[	.	PASS	SVTYPE=BND;MATEID=r_320_0	TR:VR	55:15	53:0
chr6	45495145	r_365_0	T	T]chrX:88249911]	.	PASS	SVTYPE=BND;MATEID=r_365_1	TR:VR	67:15	46:0
chrX	88249911	r_365_1	A	A]chr6:45495145]	.	PASS	SVTYPE=BND;MATEID=r_365_0	TR:VR	67:15	46:0
chr6	65222142	r_419_0	G	[chrX:135968843[C	.	PASS	SVTYPE=BND;MATEID=r_419_1	TR:VR	110:24	65:0
chrX	135968843	r_419_1	C	[chr6:65222142[C	.	PASS	SVTYPE=BND;MATEID=r_419_0	TR:VR	110:24	65:0
chrX	106290658	r_532	T	<DEL>	.	PASS	END=126450002;SVTYPE=DEL;SVLEN=-20159344;SVINSLEN=4;SVINSSEQ=AGCA	TR:VR	80:9	46:0
chrY	56838529	d_2167	T	<DEL>	.	Too_low_VAF	END=56838634;SVTYPE=DEL;SVLEN=-105;SVINSLEN=38;SVINSSEQ=GCTATATATCTCTGCACTGATCATATAGGTCATGTATC	TR:VR	460:3	297:1
chr19	19079834	r_185_0	G	[chr19:19081016[C	.	PASS	SVTYPE=BND;MATEID=r_185_1	TR:VR	82:14	22:0
chr19	19081016	r_185_1	C	[chr19:19079834[C	.	PASS	SVTYPE=BND;MATEID=r_185_0	TR:VR	82:14	22:0
chr2	214739147	r_228_0	A	A[chr8:99987347[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_228_1	TR:VR	158:3	66:0
chr8	99987347	r_228_1	A	]chr2:214739147]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_228_0	TR:VR	158:3	66:0
chr6	124847930	r_425_0	C	[chrX:153304643[TTCCAGTTCATGAACATGGGATGG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_425_1;SVINSLEN=23;SVINSSEQ=TTCCAGTTCATGAACATGGGATG	TR:VR	65:3	54:0
chrX	153304643	r_425_1	G	[chr6:124847930[CATCCCATGTTCATGAACTGGAAG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_425_0;SVINSLEN=23;SVINSSEQ=CATCCCATGTTCATGAACTGGAA	TR:VR	65:3	54:0
chr6	27479266	r_325	T	<DEL>	.	PASS	END=29204926;SVTYPE=DEL;SVLEN=-1725660;SVINSLEN=106;SVINSSEQ=AACGCAGCCTGAACTTTTGCCGACTTCGGGATGTTTTACTGAGAACAGAGAGGAATCGTATTTACTTCAGAGAGGAAATACGATGTCATATTTGCTTTCAGTTTGG	TR:VR	89:21	46:0
chr6	45499954	r_366_0	G	[chrX:69632040[G	.	PASS	SVTYPE=BND;MATEID=r_366_1	TR:VR	67:11	62:0
chrX	69632040	r_366_1	G	[chr6:45499954[G	.	PASS	SVTYPE=BND;MATEID=r_366_0	TR:VR	67:11	62:0
chr6	65237707	r_420_0	T	T]chrX:93830170]	.	PASS	SVTYPE=BND;MATEID=r_420_1	TR:VR	114:24	58:0
chrX	93830170	r_420_1	T	T]chr6:65237707]	.	PASS	SVTYPE=BND;MATEID=r_420_0	TR:VR	114:24	58:0
chr10	25586451	r_52	T	<DEL>	.	PASS	END=33031819;SVTYPE=DEL;SVLEN=-7445368	TR:VR	147:35	55:0
chr11	105782424	r_80	C	<DUP>	.	PASS	END=105944519;SVTYPE=DUP;SVLEN=162095	TR:VR	87:13	59:0
chr14_GL000225v1_random	48600	i_345	T	<INS>	.	Too_low_VAF	END=48603;SVTYPE=INS;SVINSLEN=2628;SVINSSEQ=GGGTGATCAGTGCAGAAATATTTCTACAATGCCCCCTGTAGGAAGATCCAACACAAGAGCACATAACCTAGGTGATCTGTGCAGACCTGTGTCAAAACGCCCCTGTTGGCAGAGCCTAGATAAATGTTACATCACCTGGGTGATCTTGTGCAGATACGTCACAATAGCCCCTGTAGGTGAGCCTAGACAAGAGTTACATCACCTGGGTGATCAGTGCAGAGATATGTCACAACGTTTTCCCCTGTAGGCAGAGCCTAAACAAGGTTACATCACCTGGGTTATCAGACCTGAAATATCACTACAAAGCATCCCACCAGGCCGAGCCAGCCAAGAGTTACATCTCCTGGGTGATCATGCAAAAGTATCGTCAGGCCAAAGCTCCCTGTAGGATAAATCCCAGAAAATTGTTACAGCCTACCTGGGTGATCAGAGGCAGGTATCTGTCACAATTAGGCCTTTAGGTGCAGCTGTCACAAGTGTTACATCACATAGGTGCCGCCTTCACCCACACCGGCCTATGTCACTATGCCCCCATAGGCAGATCCAAGACTCCCCTCCATCACCTGGGTGATCTCTCGTGCAGAACCCTGCCACAAGCCACCAGTAGGGAGATATAGGACAAGAGTTTCGCCCAGCCTGCGTGATCACTGCAGAGGATGATGTCACAAAACCCCTGTAGGCAGAGCGTAGACAAGAGTACCAGCAGCCCTGGGTGATCAGTGCAGAGTTATGTGCACAATGCCCCCTTTTGTCAGGCCTAGACATGGGTTACATCACCTGGGTGATCCTGATGCAGAGAGGGTGTCAGCCCCTGTAGCCAGAGCTTTGACAAGTTGCGCACATAAGGCAGGTGTGCCTCAGTGCTGGACATGTCTCAGGTGTCCCTGTAGCCACCCCACTTGACAAAGGTGACATCACCTGGGTGACCAGCACAGAGAAATGGGTCAGAGGAGACAGACCTCCATTGGGCAGGCCTAGACAAGAGTTACATCACCTGGGTGATCAGGGCAGAGATGTGGTCACAGGGATGACCCCTGTAAGCAGGGGCAGAAGCAATGCATCCCAGCCGTTGATCAGTTCAGAGATATATCTCAATGCCCCTGTCAACATGCCCCGGCGCGCCTACTGATGGATGAGTTACAGGCCATCTCGGTCATCAGTGCAGCTGGCGCAACCTTTAAAATACCTCAGGTAGAGCAGCCTCGGCCCAGGGACAGGCCTCGTTCCAGAGCATCACCTGGGTGCGCCAGTGCAGAGATATCTCACAATACCCGCTGTAAGCAGAGCCTAGGATCTTCAGTTACATCACCGCCAGGGATTAGTGCAGAGATAGGTCATAAATCCCACTGTAGGCAAGCTCTAGGCAAGTCTAGGACTGAAGCACCCATCACCTCCGCGATCAGTTCAGAGATATGCAGCCTGATGTACCTCTAGGCAGGCTCAGACAAAGTGTCACGTGTCTGGGTGACCAGTGCAGCATAAGGTCACAGGGCCAAGGTGGGCTTATGCAGAGCATAGACAAAGTTCCCAGCCTCCTGTAGGTAGAGGTAGAAAATTGTTTCCTCGCTTGGGGTGATCAGTGCAGAGCATAGGTCCACAAAGCCCCTGTAAACAGAGCGACTTCACGGGTTACATCACCTGTTTGATCAGTGGAAATGATATCACCAAAGTCCCTTGTAGGCTCCAGCCTCCGGGCAACTGTCTACATCACCTGGGACCCTGAGCAGTGGAGAGATCTGTCCCGCTGGCCACCGGGCAGGAGCAGACAAGGGCAACATCACCTCAGTGGATCAGCACAGAGGTATGCCGCAAAACGGTCCTATAGGCTGAACCTAGACAGGAGTTACTTCACCTGGGATCAGTGCAGGGATATGCTGAGACCTCTTTGCGTGGCCTCAGGGCCTCAGACAAGTGTCACTTCACCTAGGTTATCAGTGCAGGTATAAGTCACAGGAAACTCCTATTGGCAGAGCCCTTGACAAGAGTTCTTCGGCGCAAACAGGCAGGGTGCTCAAAGCAGTGAGGACCACCTGCCCCTGTAGGTCAGAGCTCTGGACAAGAGGTTTCATCACTTGGTTGATCAGTTCAGAGATGTGTCACAATGTCCATGTAGGCAGATCTAAGACAAGAGTCCATCAACTGGGTGATCAGTGCAGAGATATGTACCAATGTCCCCTGTAGGCAGTGCCTGGACATGAGTTGCATCACCTCAGAGATCAGTACATAGATATGTCACAAATCCTTCTGTAAGCAAAGCTCATACAATGACTTACATCAGCTAAGGTGATCACTGCAGTGGTATGTCAAAGTAAAAATCCCTGGCAGACAGAGCCTAGGAAAGAGTTACATCACCTTGGGTGATCAGTGCAGATATTTGACACAATGCCCCCAAATACAGATCCTAGACAAGAATTCCATCACCTGGGTGATCAGTGCAGAGATATGTCACAAACCCCCACTAGGCAGAGTATAGAGAAGAGGTCCCATCCGGCAGGTGATGAATGCAGAGATTTTTCCCACCTGCAGGCAGAGCGTGGACAAGTGATACATCACCTAGGTGATCTGTGCAGAGCTATGTCAATACGGCCCCTGCAGGGAGAGCCTAGATAAATGTTACATCACCTCCTT	TR:VR	754:3	630:1
chr2	84316410	r_223_0	T	]chr20:40644977]T	.	PASS	SVTYPE=BND;MATEID=r_223_1	TR:VR	90:6	68:0
chr20	40644977	r_223_1	T	T[chr2:84316410[	.	PASS	SVTYPE=BND;MATEID=r_223_0	TR:VR	90:6	68:0
chr6	27500676	r_326_0	C	[chr6:40174679[T	.	PASS	SVTYPE=BND;MATEID=r_326_1	TR:VR	83:17	54:0
chr6	40174679	r_326_1	T	[chr6:27500676[T	.	PASS	SVTYPE=BND;MATEID=r_326_0	TR:VR	83:17	54:0
chr6	66300061	r_421	C	<DEL>	.	PASS	END=157576711;SVTYPE=DEL;SVLEN=-91276650;SVINSLEN=1;SVINSSEQ=T	TR:VR	67:9	67:0
chrX	108380017	r_533	T	<DUP>	.	PASS	END=109446275;SVTYPE=DUP;SVLEN=1066258	TR:VR	111:45	65:0
chr10	25588875	r_53_0	G	[chr10:29334657[A	.	PASS	SVTYPE=BND;MATEID=r_53_1	TR:VR	132:26	53:0
chr10	29334657	r_53_1	A	[chr10:25588875[A	.	PASS	SVTYPE=BND;MATEID=r_53_0	TR:VR	132:26	53:0
chr15	69553589	d_910	G	<DEL>	.	PASS	END=69554757;SVTYPE=DEL;SVLEN=-1168	TR:VR	21:6	40:0
chr17	39976482	r_155	T	<DUP>	.	PASS	END=40769247;SVTYPE=DUP;SVLEN=792765	TR:VR	150:53	48:0
chr2	84352760	r_224_0	C	C]chr20:18601731]	.	PASS	SVTYPE=BND;MATEID=r_224_1	TR:VR	88:8	46:0
chr20	18601731	r_224_1	A	A]chr2:84352760]	.	PASS	SVTYPE=BND;MATEID=r_224_0	TR:VR	88:8	46:0
chr20	50453265	r_259	G	<DUP>	.	Too_low_VAF	END=50923495;SVTYPE=DUP;SVLEN=470230	TR:VR	447:20	48:0
chr6	27634984	r_327_0	A	A]chrX:133254902]	.	PASS	SVTYPE=BND;MATEID=r_327_1	TR:VR	68:21	44:0
chrX	133254902	r_327_1	C	C]chr6:27634984]	.	PASS	SVTYPE=BND;MATEID=r_327_0	TR:VR	68:21	44:0
chr8	107946307	r_460_0	T	T]chr8:112305768]	.	PASS	SVTYPE=BND;MATEID=r_460_1	TR:VR	162:17	58:0
chr8	112305768	r_460_1	A	A]chr8:107946307]	.	PASS	SVTYPE=BND;MATEID=r_460_0	TR:VR	162:17	58:0
chrX	108380052	r_534_0	G	G]chrX:108380491]	.	PASS	SVTYPE=BND;MATEID=r_534_1	TR:VR	84:46	32:0
chrX	108380491	r_534_1	T	T]chrX:108380052]	.	PASS	SVTYPE=BND;MATEID=r_534_0	TR:VR	84:46	32:0
chr15	88652650	r_136_0	C	C]chr8:143243432]	.	PASS	SVTYPE=BND;MATEID=r_136_1	TR:VR	136:8	57:0
chr8	143243432	r_136_1	G	G]chr15:88652650]	.	PASS	SVTYPE=BND;MATEID=r_136_0	TR:VR	136:8	57:0
chr17	39987798	r_156_0	A	A[chr19:53535930[	.	PASS	SVTYPE=BND;MATEID=r_156_1	TR:VR	165:41	43:0
chr19	53535930	r_156_1	T	]chr17:39987798]T	.	PASS	SVTYPE=BND;MATEID=r_156_0	TR:VR	165:41	43:0
chr2	84733169	r_225	G	<DUP>	.	PASS	END=85064806;SVTYPE=DUP;SVLEN=331637	TR:VR	74:5	52:0
chr6	27637795	r_328	T	<DUP>	.	PASS	END=57285595;SVTYPE=DUP;SVLEN=29647800	TR:VR	127:24	45:0
chr6	53491950	r_367_0	G	G[chrX:118023470[	.	PASS	SVTYPE=BND;MATEID=r_367_1	TR:VR	68:17	60:0
chrX	118023470	r_367_1	T	]chr6:53491950]T	.	PASS	SVTYPE=BND;MATEID=r_367_0	TR:VR	68:17	60:0
chr6	84234364	r_422_0	A	[chr7:72280043[G	.	PASS	SVTYPE=BND;MATEID=r_422_1	TR:VR	70:4	42:0
chr7	72280043	r_422_1	G	[chr6:84234364[G	.	PASS	SVTYPE=BND;MATEID=r_422_0	TR:VR	70:4	42:0
chr11	1079539	i_197	C	<INS>	.	PASS	END=1079540;SVTYPE=INS;SVINSLEN=168;SVINSSEQ=TGTGACGGGCACCGGGAGCTGGGGGGACACTCACCGTGCCAGGGCACCGGGAGCTGGGGGGACACTCACCGTGAGGGGCACCGGAGCTGGGGGGACACTCACCATGGGCACTGGGAGCTGGGGGACACTCACCGGACGGGCACCGAGCTGGGGGGACACTCACTGTGA	TR:VR	31:3	21:0
chr6	27638136	r_329_0	C	C]chr6:61654998]	.	PASS	SVTYPE=BND;MATEID=r_329_1	TR:VR	92:24	46:0
chr6	61654998	r_329_1	T	T]chr6:27638136]	.	PASS	SVTYPE=BND;MATEID=r_329_0	TR:VR	92:24	46:0
chr6	53503956	r_368_0	A	[chr6:61523329[G	.	PASS	SVTYPE=BND;MATEID=r_368_1	TR:VR	73:20	67:0
chr6	61523329	r_368_1	G	[chr6:53503956[G	.	PASS	SVTYPE=BND;MATEID=r_368_0	TR:VR	73:20	67:0
chr6	84234801	r_423_0	T	T[chr7:72280428[	.	PASS	SVTYPE=BND;MATEID=r_423_1	TR:VR	69:4	41:0
chr7	72280428	r_423_1	G	]chr6:84234801]G	.	PASS	SVTYPE=BND;MATEID=r_423_0	TR:VR	69:4	41:0
chr8	108882604	r_461_0	T	[chr8:108883376[CTATGTCTCCTGACCGACAT	.	PASS	SVTYPE=BND;MATEID=r_461_1;SVINSLEN=19;SVINSSEQ=CTATGTCTCCTGACCGACA	TR:VR	98:10	30:0
chr8	108883376	r_461_1	T	[chr8:108882604[TGTCGGTCAGGAGACATAGT	.	PASS	SVTYPE=BND;MATEID=r_461_0;SVINSLEN=19;SVINSSEQ=TGTCGGTCAGGAGACATAG	TR:VR	98:10	30:0
chrX	109444654	r_535	T	<DUP>	.	PASS	END=110872693;SVTYPE=DUP;SVLEN=1428039	TR:VR	116:44	62:0
chr10	27731960	r_55_0	A	]chr3:34799594]ATGTTGTTCTTTCTCCTGGAACCGCG	.	PASS	SVTYPE=BND;MATEID=r_55_1;SVINSLEN=25;SVINSSEQ=ATGTTGTTCTTTCTCCTGGAACCGC	TR:VR	146:45	54:0
chr3	34799594	r_55_1	G	GGCGGTTCCAGGAGAAAGAACAACAT[chr10:27731960[	.	PASS	SVTYPE=BND;MATEID=r_55_0;SVINSLEN=25;SVINSSEQ=GCGGTTCCAGGAGAAAGAACAACAT	TR:VR	146:45	54:0
chr12	120507151	d_544	T	<DEL>	.	PASS	END=120507218;SVTYPE=DEL;SVLEN=-67	TR:VR	46:10	15:0
chr20	50826063	r_260_0	G	G]chr20:59740154]	.	PASS	SVTYPE=BND;MATEID=r_260_1	TR:VR	350:74	57:0
chr20	59740154	r_260_1	T	T]chr20:50826063]	.	PASS	SVTYPE=BND;MATEID=r_260_0	TR:VR	350:74	57:0
chr6	27685812	r_330_0	C	[chrX:115904699[G	.	PASS	SVTYPE=BND;MATEID=r_330_1	TR:VR	109:23	37:0
chrX	115904699	r_330_1	G	[chr6:27685812[G	.	PASS	SVTYPE=BND;MATEID=r_330_0	TR:VR	109:23	37:0
chr7	158360319	i_1436	A	<INS>	.	PASS	END=158360319;SVTYPE=INS;SVINSLEN=175;SVINSSEQ=CATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACTCCACATCCACCCACACCCAGGATGACGCACAGACCCCACATCCACCCTCATCCTGGCAACCCACAGACCCCGCGTCCACCCTCACCCAGGACGACGCACAGACCCCAC	TR:VR	47:3	20:0
chr8	111358845	r_462_0	A	A]chr8:112698792]	.	PASS	SVTYPE=BND;MATEID=r_462_1	TR:VR	214:14	49:0
chr8	112698792	r_462_1	G	G]chr8:111358845]	.	PASS	SVTYPE=BND;MATEID=r_462_0	TR:VR	214:14	49:0
chrX	110493701	r_536_0	C	[chrX:110529114[A	.	PASS	SVTYPE=BND;MATEID=r_536_1	TR:VR	97:7	61:0
chrX	110529114	r_536_1	A	[chrX:110493701[A	.	PASS	SVTYPE=BND;MATEID=r_536_0	TR:VR	97:7	61:0
chr10	27781232	r_56_0	A	A[chr3:2198566[	.	PASS	SVTYPE=BND;MATEID=r_56_1	TR:VR	141:41	56:0
chr3	2198566	r_56_1	A	]chr10:27781232]A	.	PASS	SVTYPE=BND;MATEID=r_56_0	TR:VR	141:41	56:0
chr14	58474457	r_112_0	A	A]chr4:48297729]	.	PASS	SVTYPE=BND;MATEID=r_112_1	TR:VR	80:21	68:0
chr4	48297729	r_112_1	A	A]chr14:58474457]	.	PASS	SVTYPE=BND;MATEID=r_112_0	TR:VR	80:21	68:0
chr17	40493285	r_157_0	G	[chr17:40635811[A	.	PASS	SVTYPE=BND;MATEID=r_157_1	TR:VR	128:53	46:0
chr17	40635811	r_157_1	A	[chr17:40493285[A	.	PASS	SVTYPE=BND;MATEID=r_157_0	TR:VR	128:53	46:0
chr6	27696759	r_331_0	T	T]chrX:69341775]	.	PASS	SVTYPE=BND;MATEID=r_331_1	TR:VR	79:18	48:0
chrX	69341775	r_331_1	G	G]chr6:27696759]	.	PASS	SVTYPE=BND;MATEID=r_331_0	TR:VR	79:18	48:0
chr6	56476869	r_369	T	<DEL>	.	PASS	END=62644821;SVTYPE=DEL;SVLEN=-6167952	TR:VR	80:8	58:0
chr8	112305509	r_463_0	A	[chr8:112305777[A	.	PASS	SVTYPE=BND;MATEID=r_463_1	TR:VR	89:17	27:0
chr8	112305777	r_463_1	A	[chr8:112305509[A	.	PASS	SVTYPE=BND;MATEID=r_463_0	TR:VR	89:17	27:0
chrX	110494542	r_537	A	<DEL>	.	PASS	END=110529988;SVTYPE=DEL;SVLEN=-35446	TR:VR	95:7	61:0
chrY	11301642	d_2120	A	<INS>	.	Too_small_size;Too_low_VAF	END=11301656;SVTYPE=INS;SVINSLEN=19;SVINSSEQ=TTCCACTCCAGTTGACTCA	TR:VR	350:4	215:1
chr1	152277216	r_20_0	T	[chr1:152402121[A	.	PASS	SVTYPE=BND;MATEID=r_20_1	TR:VR	100:5	62:0
chr1	152402121	r_20_1	A	[chr1:152277216[A	.	PASS	SVTYPE=BND;MATEID=r_20_0	TR:VR	100:5	62:0
chr10	27850747	r_57_0	G	G]chr3:31192386]	.	PASS	SVTYPE=BND;MATEID=r_57_1	TR:VR	154:51	47:0
chr3	31192386	r_57_1	T	T]chr10:27850747]	.	PASS	SVTYPE=BND;MATEID=r_57_0	TR:VR	154:51	47:0
chr13	20067440	r_95_0	G	GA]chr13:40172824]	.	PASS	SVTYPE=BND;MATEID=r_95_1;SVINSLEN=1;SVINSSEQ=A	TR:VR	92:18	39:0
chr13	40172824	r_95_1	A	AT]chr13:20067440]	.	PASS	SVTYPE=BND;MATEID=r_95_0;SVINSLEN=1;SVINSSEQ=T	TR:VR	92:18	39:0
chr6	27696760	r_332_0	C	]chrX:135050920]A	.	PASS	SVTYPE=BND;MATEID=r_332_1	TR:VR	72:12	48:0
chrX	135050920	r_332_1	A	A[chr6:27696760[	.	PASS	SVTYPE=BND;MATEID=r_332_0	TR:VR	72:12	48:0
chr6	56633777	r_370_0	C	C[chrX:133085589[	.	PASS	SVTYPE=BND;MATEID=r_370_1	TR:VR	68:14	61:0
chrX	133085589	r_370_1	A	]chr6:56633777]A	.	PASS	SVTYPE=BND;MATEID=r_370_0	TR:VR	68:14	61:0
chr8	113310331	r_464	T	<DUP>	.	PASS	END=113386438;SVTYPE=DUP;SVLEN=76107	TR:VR	209:12	59:0
chr9	16653462	i_1526	A	<INS>	.	PASS	END=16653462;SVTYPE=INS;SVINSLEN=63;SVINSSEQ=AAAAGGGCTTCTTACACCATTGCCCAGACATCCTTCAGTTTATCTCACGGACAAATGAAAATA	TR:VR	42:7	32:0
chrX	110549674	r_538	C	<DEL>	.	PASS	END=110652244;SVTYPE=DEL;SVLEN=-102570	TR:VR	105:34	60:0
chrY	11302291	d_2121	A	<DEL>	.	Too_low_VAF	END=11302352;SVTYPE=DEL;SVLEN=-61;SVINSLEN=6;SVINSSEQ=TTGCTT	TR:VR	358:12	209:1
chr17	40592489	r_158	T	<DEL>	.	PASS	END=40740168;SVTYPE=DEL;SVLEN=-147679	TR:VR	141:64	58:0
chr20	64132791	d_1421	T	<DEL>	.	PASS	END=64132864;SVTYPE=DEL;SVLEN=-73;SVINSLEN=40;SVINSSEQ=AGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGAC	TR:VR	85:8	23:0
chr6	2835939	r_321_0	C	C]chr6:40329428]	.	PASS	SVTYPE=BND;MATEID=r_321_1	TR:VR	71:12	46:0
chr6	40329428	r_321_1	G	G]chr6:2835939]	.	PASS	SVTYPE=BND;MATEID=r_321_0	TR:VR	71:12	46:0
chr6	57031829	r_371_0	T	]chrX:135610044]A	.	PASS	SVTYPE=BND;MATEID=r_371_1	TR:VR	92:29	58:0
chrX	135610044	r_371_1	A	A[chr6:57031829[	.	PASS	SVTYPE=BND;MATEID=r_371_0	TR:VR	92:29	58:0
chr8	113379379	r_465	A	<DUP>	.	Too_low_VAF	END=113838814;SVTYPE=DUP;SVLEN=459435;SVINSLEN=17;SVINSSEQ=AATAAATATTTATTATT	TR:VR	219:5	66:0
chr1	81031996	r_5_0	T	TTTCTCC]chr1:81083344]	.	PASS	SVTYPE=BND;MATEID=r_5_1;SVINSLEN=6;SVINSSEQ=TTCTCC	TR:VR	88:19	45:0
chr1	81083344	r_5_1	T	TGGAGAA]chr1:81031996]	.	PASS	SVTYPE=BND;MATEID=r_5_0;SVINSLEN=6;SVINSSEQ=GGAGAA	TR:VR	88:19	45:0
chr17	40706271	r_159_0	G	G[chr19:52043628[	.	PASS	SVTYPE=BND;MATEID=r_159_1	TR:VR	154:48	47:0
chr19	52043628	r_159_1	T	]chr17:40706271]T	.	PASS	SVTYPE=BND;MATEID=r_159_0	TR:VR	154:48	47:0
chr18	40588301	r_170_0	A	]chr3:96832828]T	.	PASS	SVTYPE=BND;MATEID=r_170_1	TR:VR	96:15	58:0
chr3	96832828	r_170_1	T	T[chr18:40588301[	.	PASS	SVTYPE=BND;MATEID=r_170_0	TR:VR	96:15	58:0
chr19	21750027	r_186	T	<DEL>	.	PASS	END=22771714;SVTYPE=DEL;SVLEN=-1021687;SVINSLEN=3;SVINSSEQ=TTT	TR:VR	120:6	48:1
chr19	54342160	d_1128	C	<INS>	.	Too_low_VAF	END=54342233;SVTYPE=INS;SVINSLEN=73;SVINSSEQ=ACGTAACCCACCATTGTATCCTCCCCACCTCCAGGGCATGTAACCCACCACTGTATCCCCCAACCAGGGTGTG	TR:VR	141:4	14:0
chr6	29078688	r_333_0	G	GG]chr9:93999575]	.	PASS	SVTYPE=BND;MATEID=r_333_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	66:7	60:0
chr9	93999575	r_333_1	C	CC]chr6:29078688]	.	PASS	SVTYPE=BND;MATEID=r_333_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	66:7	60:0
chr6	57034288	r_372_0	T	T]chrX:147975624]	.	PASS	SVTYPE=BND;MATEID=r_372_1	TR:VR	118:25	57:0
chrX	147975624	r_372_1	A	A]chr6:57034288]	.	PASS	SVTYPE=BND;MATEID=r_372_0	TR:VR	118:25	57:0
chr8	115379312	r_466	T	<DUP>	.	Too_low_VAF	END=116615297;SVTYPE=DUP;SVLEN=1235985	TR:VR	195:5	64:0
chrX	111020232	r_539_0	T	[chrX:115682727[G	.	PASS	SVTYPE=BND;MATEID=r_539_1	TR:VR	68:29	57:0
chrX	115682727	r_539_1	G	[chrX:111020232[G	.	PASS	SVTYPE=BND;MATEID=r_539_0	TR:VR	68:29	57:0
chr1	81051392	r_6_0	A	]chr3:95770401]T	.	PASS	SVTYPE=BND;MATEID=r_6_1	TR:VR	99:15	56:0
chr3	95770401	r_6_1	T	T[chr1:81051392[	.	PASS	SVTYPE=BND;MATEID=r_6_0	TR:VR	99:15	56:0
chr13	26913972	r_96_0	A	]chrX:74992493]A	.	PASS	SVTYPE=BND;MATEID=r_96_1	TR:VR	69:4	71:0
chrX	74992493	r_96_1	A	A[chr13:26913972[	.	PASS	SVTYPE=BND;MATEID=r_96_0	TR:VR	69:4	71:0
chr17	42206385	d_1036	C	<DEL>	.	PASS	END=42206581;SVTYPE=DEL;SVLEN=-196;SVINSLEN=5;SVINSSEQ=CGCAA	TR:VR	55:21	14:0
chr18	40588467	r_171_0	T	T]chr3:96832075]	.	PASS	SVTYPE=BND;MATEID=r_171_1	TR:VR	95:15	57:0
chr3	96832075	r_171_1	T	T]chr18:40588467]	.	PASS	SVTYPE=BND;MATEID=r_171_0	TR:VR	95:15	57:0
chr20	2825777	r_232_0	T	TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[chr6:32355033[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_232_1;SVINSLEN=31;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	93:3	48:0
chr6	32355033	r_232_1	A	]chr20:2825777]TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_232_0;SVINSLEN=31;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TR:VR	93:3	48:0
chr6	2916265	r_322_0	C	[chr6:61743821[T	.	PASS	SVTYPE=BND;MATEID=r_322_1	TR:VR	101:33	51:0
chr6	61743821	r_322_1	T	[chr6:2916265[T	.	PASS	SVTYPE=BND;MATEID=r_322_0	TR:VR	101:33	51:0
chr6	57154877	r_373_0	C	[chr6:61186801[A	.	PASS	SVTYPE=BND;MATEID=r_373_1	TR:VR	136:32	54:0
chr6	61186801	r_373_1	A	[chr6:57154877[A	.	PASS	SVTYPE=BND;MATEID=r_373_0	TR:VR	136:32	54:0
chrX	111029183	r_540_0	T	T]chrX:115904682]	.	PASS	SVTYPE=BND;MATEID=r_540_1	TR:VR	94:26	49:0
chrX	115904682	r_540_1	C	C]chrX:111029183]	.	PASS	SVTYPE=BND;MATEID=r_540_0	TR:VR	94:26	49:0
chr1	156655087	r_21_0	C	[chr1:172558085[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_21_1	TR:VR	112:3	62:0
chr1	172558085	r_21_1	T	[chr1:156655087[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_21_0	TR:VR	112:3	62:0
chr13	26913988	r_97_0	C	C[chrX:74991600[	.	PASS	SVTYPE=BND;MATEID=r_97_1	TR:VR	71:4	72:0
chrX	74991600	r_97_1	G	]chr13:26913988]G	.	PASS	SVTYPE=BND;MATEID=r_97_0	TR:VR	71:4	72:0
chr19	54349128	d_1129	A	<DEL>	.	Too_low_VAF	END=54349587;SVTYPE=DEL;SVLEN=-459;SVINSLEN=95;SVINSSEQ=TGCATGGAGGGAGGACACAGATCCTGAGGATGGATGGAGGGAGGAAACAGATCCTGAGGGTGGATGGATGGATGGAGGACACAGATCCTGAGGGT	TR:VR	154:5	14:0
chr3	124110344	d_1579	T	<INS>	.	PASS	END=124110339;SVTYPE=INS;SVINSLEN=85;SVINSSEQ=GTCATACTTTGATATATATATGACATATATGTCATACTTTGATATATATATGACATATATGTCATACTTTGATATATATATGACA	TR:VR	41:4	38:1
chr6	57177045	r_374_0	A	A[chrX:78531464[	.	PASS	SVTYPE=BND;MATEID=r_374_1	TR:VR	73:25	54:0
chrX	78531464	r_374_1	C	]chr6:57177045]C	.	PASS	SVTYPE=BND;MATEID=r_374_0	TR:VR	73:25	54:0
chr8	115632078	r_467	C	<DUP>	.	PASS	END=116420469;SVTYPE=DUP;SVLEN=788391	TR:VR	229:21	68:0
chrX	111217184	r_541_0	G	[chrX:133713122[T	.	PASS	SVTYPE=BND;MATEID=r_541_1	TR:VR	57:22	56:0
chrX	133713122	r_541_1	T	[chrX:111217184[T	.	PASS	SVTYPE=BND;MATEID=r_541_0	TR:VR	57:22	56:0
chr1	156739494	r_22_0	A	A]chr1:181523883]	.	PASS	SVTYPE=BND;MATEID=r_22_1	TR:VR	110:7	56:0
chr1	181523883	r_22_1	T	T]chr1:156739494]	.	PASS	SVTYPE=BND;MATEID=r_22_0	TR:VR	110:7	56:0
chr10	29446765	r_58_0	G	G]chr10:40400791]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_58_1	TR:VR	284:3	115:0
chr10	40400791	r_58_1	G	G]chr10:29446765]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_58_0	TR:VR	284:3	115:0
chr14	99846049	r_113	C	<DUP>	.	PASS	END=100303140;SVTYPE=DUP;SVLEN=457091	TR:VR	75:20	65:0
chr14_GL000225v1_random	114309	d_858	C	<INS>	.	Too_low_VAF	END=114330;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=TGGGATATAACTCTGCACTGATCACTGAGGTGATGTAAAACTTGTGTAGGCTTTGCCTACAGTAGGATTTATGACATATCTGCACAGATCACCCTGGTGATGTAAATCTTG	TR:VR	133:4	74:0
chr18	43662206	r_173	T	<DEL>	.	PASS	END=63348780;SVTYPE=DEL;SVLEN=-19686574	TR:VR	69:15	53:0
chr6	57189298	r_375_0	A	]chrX:135968811]T	.	PASS	SVTYPE=BND;MATEID=r_375_1	TR:VR	101:25	71:0
chrX	135968811	r_375_1	T	T[chr6:57189298[	.	PASS	SVTYPE=BND;MATEID=r_375_0	TR:VR	101:25	71:0
chr10	29529663	r_59_0	A	[chr10:29535865[C	.	PASS	SVTYPE=BND;MATEID=r_59_1	TR:VR	62:28	31:0
chr10	29535865	r_59_1	C	[chr10:29529663[C	.	PASS	SVTYPE=BND;MATEID=r_59_0	TR:VR	62:28	31:0
chr13	30872261	r_99_0	T	[chr13:30872871[C	.	PASS	SVTYPE=BND;MATEID=r_99_1	TR:VR	52:17	37:0
chr13	30872871	r_99_1	C	[chr13:30872261[C	.	PASS	SVTYPE=BND;MATEID=r_99_0	TR:VR	52:17	37:0
chr18	43678032	r_174_0	T	[chr6:43369554[G	.	PASS	SVTYPE=BND;MATEID=r_174_1	TR:VR	73:17	45:0
chr6	43369554	r_174_1	G	[chr18:43678032[G	.	PASS	SVTYPE=BND;MATEID=r_174_0	TR:VR	73:17	45:0
chr6	29963927	r_335_0	A	A]chrX:138109721]	.	PASS	SVTYPE=BND;MATEID=r_335_1	TR:VR	104:22	60:0
chrX	138109721	r_335_1	A	A]chr6:29963927]	.	PASS	SVTYPE=BND;MATEID=r_335_0	TR:VR	104:22	60:0
chrUn_GL000216v2	74718	i_1560	A	<INS>	.	Too_low_VAF	END=74718;SVTYPE=INS;SVINSLEN=539;SVINSSEQ=ATTTATTTACTCTTATGTCCATAATGCCTGACACAGGAACTATTCTCACATACAAACTCATGAGGCCATAATTCCTGAGAACATATGTACATTGTAGTGACTCATAAAGGCTTGAAATAAATTTTTAAAATGATTAATTGGGAAGTCCATGAACTTGACATCTTGATGTAGAAGAAAAGCAAGGACAGATGAAGAAGTTATACACGATACTTGAAATACCAGAAGAATATAATCAGAGAGCTCAATAAATTAATCCTAGATTTTTAGATGTGAAGAAGTTTCTGAGAAATATTTGGAATGACATGGCTCTAGGGATGAGTACACTTAACAGAGACCATTAGCCAGAGTCAGAGCTTTTCAGAGTGAAGAAATTGCATTGCAGGGGGAAAGACTGTTGTATACTAAATAGAAATTGTCATTAAATAGACTAAGCAAGAGGCTGATGATCTGTGGATGACAGACGCAAAAAAGGTGTGGAGATAGAGGTAAATGCCATAATCTTCAAAGAAGATATTTTTGTGCCCAGAAAGAAATTTCAT	TR:VR	327:3	157:1
chrX	62791182	r_499_0	T	[chrX:83910723[A	.	PASS	SVTYPE=BND;MATEID=r_499_1	TR:VR	52:14	47:0
chrX	83910723	r_499_1	A	[chrX:62791182[A	.	PASS	SVTYPE=BND;MATEID=r_499_0	TR:VR	52:14	47:0
chr10	1008739	d_353	C	<DEL>	.	PASS	END=1008793;SVTYPE=DEL;SVLEN=-54	TR:VR	74:11	35:0
chr10	29535105	r_60_0	T	T]chr10:31395271]	.	PASS	SVTYPE=BND;MATEID=r_60_1	TR:VR	83:30	60:0
chr10	31395271	r_60_1	T	T]chr10:29535105]	.	PASS	SVTYPE=BND;MATEID=r_60_0	TR:VR	83:30	60:0
chr6	29965320	r_336_0	T	[chr6:57378905[A	.	PASS	SVTYPE=BND;MATEID=r_336_1	TR:VR	104:23	53:0
chr6	57378905	r_336_1	A	[chr6:29965320[A	.	PASS	SVTYPE=BND;MATEID=r_336_0	TR:VR	104:23	53:0
chr6	57250451	r_376_0	T	T]chrX:138798198]	.	PASS	SVTYPE=BND;MATEID=r_376_1	TR:VR	127:23	67:0
chrX	138798198	r_376_1	T	T]chr6:57250451]	.	PASS	SVTYPE=BND;MATEID=r_376_0	TR:VR	127:23	67:0
chrX	67190571	r_500	G	<DEL>	.	PASS	END=135901974;SVTYPE=DEL;SVLEN=-68711403	TR:VR	68:30	53:0
chr10	29630355	r_61	G	<DUP>	.	PASS	END=44988205;SVTYPE=DUP;SVLEN=15357850	TR:VR	80:29	52:0
chr13	31474000	r_101	A	<DEL>	.	PASS	END=39367933;SVTYPE=DEL;SVLEN=-7893933	TR:VR	83:18	58:0
chr18	46549442	r_175	A	<DUP>	.	PASS	END=46847649;SVTYPE=DUP;SVLEN=298207	TR:VR	94:13	61:0
chr20	55691942	r_261	T	<DEL>	.	PASS	END=57455764;SVTYPE=DEL;SVLEN=-1763822	TR:VR	221:54	49:0
chr3	34276182	r_275_0	C	CTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[chr4:74716283[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_275_1;SVINSLEN=43;SVINSSEQ=TTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TR:VR	115:4	58:1
chr4	74716283	r_275_1	T	]chr3:34276182]AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_275_0;SVINSLEN=43;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAA	TR:VR	115:4	58:1
chr6	158179068	r_426_0	A	[chr7:130237733[A	.	PASS	SVTYPE=BND;MATEID=r_426_1	TR:VR	54:17	59:0
chr7	130237733	r_426_1	A	[chr6:158179068[A	.	PASS	SVTYPE=BND;MATEID=r_426_0	TR:VR	54:17	59:0
chr6	29972124	r_337_0	A	A]chr6:63930895]	.	PASS	SVTYPE=BND;MATEID=r_337_1	TR:VR	123:19	54:0
chr6	63930895	r_337_1	C	C]chr6:29972124]	.	PASS	SVTYPE=BND;MATEID=r_337_0	TR:VR	123:19	54:0
chr6	57287922	r_377_0	T	[chrX:135459575[C	.	PASS	SVTYPE=BND;MATEID=r_377_1	TR:VR	77:17	51:0
chrX	135459575	r_377_1	C	[chr6:57287922[C	.	PASS	SVTYPE=BND;MATEID=r_377_0	TR:VR	77:17	51:0
chrX	68261222	r_501_0	G	G]chrX:85938328]	.	PASS	SVTYPE=BND;MATEID=r_501_1	TR:VR	83:35	56:0
chrX	85938328	r_501_1	A	A]chrX:68261222]	.	PASS	SVTYPE=BND;MATEID=r_501_0	TR:VR	83:35	56:0
chr10	29632176	d_375	G	<DEL>	.	PASS	END=29632639;SVTYPE=DEL;SVLEN=-463	TR:VR	59:30	25:0
chr11	1294333	d_481	G	<INS>	.	PASS	END=1294364;SVTYPE=INS;SVINSLEN=78;SVINSSEQ=AAAGCCCGCGTGGCTCACAGTGTGTCTCCTTTCCCTGCATTTCTACGAAAGCCCGCGTGGCTCACAGTGTGTCTCCTT	TR:VR	46:11	27:0
chr3	148708459	r_280	C	<DUP>	.	PASS	END=148860415;SVTYPE=DUP;SVLEN=151956	TR:VR	84:7	64:0
chr6	158378651	r_427	A	<DEL>	.	PASS	END=167860243;SVTYPE=DEL;SVLEN=-9481592	TR:VR	65:4	47:0
chr6	57303255	r_378	T	<DEL>	.	PASS	END=63780269;SVTYPE=DEL;SVLEN=-6477014	TR:VR	121:19	54:0
chrX	68449541	r_502	G	<DEL>	.	PASS	END=155438885;SVTYPE=DEL;SVLEN=-86989344	TR:VR	73:20	39:0
chr16	33338369	i_442	C	<INS>	.	PASS	END=33338385;SVTYPE=INS;SVINSLEN=3575;SVINSSEQ=AGCCGAGGCTGGGGCTGTGACTTCTACAGAGGTTGGTGCGACGGGGGGCATCCCTGCCCTCCCAGGGTCTGCCTATGGGTCATGGGGAACATGGTTCGAGGCCCTGGCTGGCTTGCCACACAGCAGTGTGTTGCTGCGTGAGTGGTCTTGTCTGCAGGCTTTAGACTCAGCCGGGTCGTTTGTGCCACGTGGGGTCTGCGCCGCCCCAGGGGCCGCATCTCTTTCAGCCACAGGATGTGCATCTTAGGGTTGCAGCAGATGGGGCTCCTGTGCCATGTGGGGTCCAACCCCTTGGCCTGAGCAAGGCGGCCAGTGTGGCATTGTGCTGGTGACGACCTCCGGCCTCTGTTCCTTCCCTGGCTCTGAGTCATAAAGGCCTGGCAGTCCCACCTGGGAGCCGTGTCTCCTCTAGGAACTGCTGGGCATGGCTGGGTCCGGTCTGCCTCATTCCTGCATCTGATGCCCAGCAGTTCTTCCCCAACTTGCCCCCATTCTCTATCTACCCCCTTCTCCTCCATCTCCTCCATCTCCCCCGTCCCCTCCGTCTTGCCCGTCTCCATTTCCTCCAACTCCCCCTTCTCCATGTCATGGCTGTCTAGGCTCCATCCCTCCGCAGGCTCGGTCCCCCTTGTTCTGGGCAGGGCTCTGGGTGCCGGTCTGGTGCCAGTGCTGGGAGCCTGTGGTGCCCGTCACCCCTGCTCCACCTTGAGGAGCTGTGTCCTGTCCCACGAGGAGGTGCCCCTTGGACCTCAGGGCTGCAAGCCATGGCTGGGTCCGGCTCTGCCTCATTCCTGTATCTGATGCCCCCAGTTCTCCCCCATTTCCCCCTTCTCCATCTCCTCTGTGTCTCCCGTCTCATGGCTGTCCAAGCCCCATCCTCCACCCAGGCTGGGTCCCTCATTCTGGGAAGCCCATCTTGCCATGCCCATCCCTGCCGCCCCTCAGGACAGCGCTCTGGATGCCGGTCTGGTGCCAGTGCTGGCTGGCCTGTGGTGCCTGTCACCCCTGCTGCACCTTGAGGAGCTGTGTCCTTGTCCTGGCTTGGAGGTGCCCTGGGACCTCAGGGCCATGGCTGGCATCGTTGCTGTGGAGTGGCTGTCACCTTTCATGGTCATCCTGCAACAGAGCTCCTGCTGCTTCTGGGTGAACCTGGGGCTGCCCCCGTGAACACTCTTGGGTGGCTTGGCTTCACTGGCATGAAGGGACCCGTGAACACTCTTGGGTCTGACATGAAGGGACCATGTGAGGGAGGGGTGGGTGGGCTGGGTCCCCTGCATGGGGATCGCCAAGGGGTGATGGCCACGAAATGCTGGGGACCCAAGGTTGTCATTCACAGAGGGTGAGGTGGGGGATGCCAGAGGCGCCTCTGCCTGGAACACCCTGGCTTCACATGGCTAGCAGGATGCTGGACGCTGGCCACGGTGAGGGTGATGCAGGTGCTTTTCTTGTGGTGTCCCTGGCCCACCTCACACGTGAGCTCTCAGGGAAATGGACCCCCAGAACACGTGGAGGGCAGGACCGCTGGGCTCTTGGGTCTCCCCGCTGTGCTGCCGTCCACGAGGACCCCCACTTCTCCAGCAAAGGTGCTGGGTGTGCATGCCTGGCCCTGGCACAGCCCAGAGCATCTGGGGCCGTGGCTGGGGGAAGGACGGGGTGCTTGGGGAATGCAGTGGGTATGGGGATGTCGGAGGACACTCGGGTTGTGCAGGAGCCTCACCAGGGATGTGGCTTGGTGGGTGGGACGCTGTCTTTCGTTTCACAGCCCCAGGGAGGCTTCTGATGTCTCAGCCTTGAACCCTAATTGGGGGGCTCCTGGTGTGTCAGTGCTTGGGAAGCTGAGGGTCCCAGTCAGAGGTGAACCCCTCACTTGGCCCCTCACTCCCATGACCATGGGCTCCAGCTCATAGGCTGGTGTGTGAGGGGTGTCCTGAGGTGGTGTGGGGCAGACATGCTCTCCCAGATGGGCTCCCCGGAGCTTGGGGCAGGGTGGGGCCTGCAGGCTGTGGCTCCCAGTGTCACTTCCCTGCAGCAGCCACAGTCAGACTCTCCGGCCCTGCACCTGTCCTGTTGTTGGGGACCCTGACCCTTCGCAGACCCAGGTGGGGGCATCCGGGAATTGGGGGAGCACCTGGTGACAGAGGACACCTTGGGGGCAGCAGCCATTTCCCTGGGAGGTGCGGCCAGTCTACCCACTGCCTGGCCCGCACCGTCTCTCCTCAGGGGTCATGGGACCACCCTGTGCATCCACTCCTTCACAGCCACAGCTGCCAGTAGATTAACGGGGCGTGTGTGCTGCTCTTGGGGTGGTCCCGGCCCGGCCCGGCCCTGCCCTCCCCACCAAGTGCCCAGGGCCGCCCTGCCCGCCTGTGCCCTGCCCTGTAGATGCTGCCACCTCCCTTTCCTGGGGGAGCATTTTGTCTTGTGTGAGGACGGGGTCATTCCCATGGTCACCACCTGTGACCCTCCCCTGCCTGCAGAGGGAACAGAGCTGGGCCTGGGCTTATCCATGTCGGGTGCCCCTGGGGGACCTGGGGGCTCGTGGCCTCCCCTGCACACAGTGGCTCCCCTGGCAGGGCCTCCGAACACCCTCATTTAGGTGTCGCTGCACGTGGCTCCCAGGTGTGGACGTCCCCACTCTGGCGAGGGCTCCTGGCTTCCTTCTGGGGTCGCTTGCTGGAATGTGGCCTGGGTCCATGGCTCTGGGAGGGAACAGCCCAAGGGTGGGGACCCCTGGCTGGGGAGGAGGCCCCGCAGAGAGGCCCAGACTGTATCCCGATGCATCTGGCGTGGCCGCGGTCCCCCTCCAGCGCCGACGTTTGTAAATTCTGAAAGGAGCCTGGCTGCTGTGGCTGATTGGGAGCCAAGCCCGTGACTGAAAAATCCTCCAAACATTCATTCAAAAATACAAGTGTGATCGCCAGAAACGCTTTTGTACATTTACACAAAACATTCATACAGGCCATGGCGGAGGCTCCTGTCTAGGACTGGCAAGGCGCCCGGGAGCCGCCGGTCACCCTTGTGCCTACACAGACCCTTTCCAGAAAGATGCAGGCCCTGGAACTGAGGCCGGGTCAAGTCGGGAATGGCAAGTGCCAGAGGGTGTCAGTGTGGGAACCTGTCCTGTTCACGAGCGGCCCTACATGTCCCCCTTGGCACAGAGCTCTAGGCAGGTCCAGCCACGAACCCACAGCGGCAATCAACACGCTTCTGTGAATAAATAAAAATTTATCATTCCATGCAAACACACTCATTTTCCACAAAAGACAACAGCTTTACACAAGCGGCGGTGTCCCAGTGGTGGCCGTGGCACGTGTGGAGCGGCCCTCGCAGCGGCGTTCTCATGGGTGGCGTCACAGTGGCTCCAGGTCCTCATCCCCGCATGCATACTCGTACAGGTCCACGGCGCCCAGGGGTGAGGGCACCTCGAAGAAGGGCCTCTGGGCCAGCGGGGACTGCAGCGCACTCTAGCTTCTGCTCCACAGGTCTGAGCTCGGCCTCGAACCTGCAACGAGGGATGGTGAAGACGTGGACAGCTGGCGTGGAGCAGGCCCTGGGCCCTGTTTTCCGAGAAATGC	TR:VR	100:5	98:1
chr3	38084387	i_1091	G	<INS>	.	PASS	END=38084387;SVTYPE=INS;SVINSLEN=2262;SVINSSEQ=TAGCTGCGCTGCTGCTGGTGAAGCAGAAAGAGTGAGTAGCAGCCGCTGCCAGTGGTGGTGGCAGGAAAGAGAGCGGTAGCCAGTAGTGTGGTGGTGGTCGGCGGGTGTACTGCTGCTGGCACGTGGTGGTGGTAGCTAGTTGTGTTGTTGTGCCGCGTGGTGCTGGTGGTGGTGCTGGTGGTAGTAGTAGTACGGTGGTGGTGGTCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTCGGGCGGTGGTGGTGGTGCCTGGTGGTGCTGTGGTGGTGGTGGTGGTGGTGGTGGTGCTTTCCAGCAGCGCCGCCACAGCCGCTTTCTGCTGGCATCATACATGGCGCTGCGCTTTCGCTGTTATATTGCCGAGCATCCGCGCTTTCGCTGCTGCTGTTTTCAGCGCTGTTGTTGAAGAGCGCTTTCGTTTTTCTGCTGAGCGGCGGCAGAAAGAGCCGCTTTCTGCGCGCCGAGCAGACCAGCAGCGCGCTTTTACAGAGCGCCGAGTATGGCGCATCATAAATATTATTCCTGCCCGGTTGCCATTACGGTCACCGCCTGTTTCCATTGCTTTATGGCGTTGTTATTAAGGTTTGTTGTTTTTATTTTCATTGTTTGTTGTCTTCGCTACGCACAGACAGTTGTTTTTATGGTTGTTGTTTCCATATAAAGAGTATTATTATTATTATTTCCATGTTTCCCCCCGTTGTTATTTATGAGCGCTGGTTTGTTTTGGTTATTTACACCATTTATGGCTGCTATTCTCTGTTTCCACTGCGTTTCATCCCAGGCTTTTTGTTGTCGTGGTTTCCAGCCTTCTTCATACAGCGGTTTTCGCTGCTGGCATAGCTATTATTTACTTCTCCGCCAGCTTCACGCTATTTACAGTTGTTGCCAATCATTATTATTCTCCTTACGGCGGCCAAATATTTCCAGCATTTTGCCATGACCAGAAAGAGAGCCTCTCTCTTTGTTGTTGTCGAGCGGCTTGCGCCGTTTGTTTGTTTTATGCATGTTTTCGAGCGGCGGCGAGCAGCAGCGGCGGCAGCAGCAGCGGCAGCTATTATTTTGGCGGCGGCAGCAGCTTTTTAAGTGGCATTGCAGCAGTTTGCTAGCATTGCGGCAGCAGCAGCAGCGGCAGAGCAGCAGCGGCTTTGCGGCAGCAGCGGCTTGCAGCAGCGAGCTAACAGCAGCGGCGGCCTGGCAGCAGCAGCCAGCGGCTGCGGCTGGCAGCTTTGCAGCAGTCATATAGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGTCAGCAGCAGCGGCGGCAGCAGCGGCAACAGCAGCAGTTTGGTGGCGGCGCGCAGCAGCAGTGGCAATGCGGCGCGCAGAAAGCAGCAGCAGCGGCAGAAAGAAAGCAGTGGCGGCAGCAGCAGCGGCGGCGGCATTGCAGTTTCGTTTGCGGCTCTAAGCAGCGGCGGCGGCAGCAGTGGCAGCAGCAGTTACGGGCGGCGGTTAAGCGAGCGGCGGCAGAAAGTGCGCCAACAGCGGCGGCGGCAGAAAGCAGCTGAGTGTCGCGGAAAAAGAGAGCGGCAGCAGCAGCGGCGGCGGATGAGCGGCGGCGGCAAGAGCAGCGGCGGCGGTTTTTTAAAGCAGCAGCGGCGTACGGCAGCAGCAGCTTGTTTGCAGCAGCAGCAGTTTTCGTTAAGCAGCTGGCGGCGGCTGGCAGCAGCGGCGGCGCAGAAAGAGCGGCGGCGAGCAGCAGCAGAAAGCAGCAGCAGCGGCGGCGAGAAAGAAAGAAAGAAAGCTCTTCTTCAGCAGCGGCGGCGGCAGCAGCGGCGGCAGCATGGCAACAGCAGCAGGCGGCGGCGGCGGCAGCGAGCAGCGGCATGGCAGCATGCAGTGGCAGCAGCAGCAGCAGGCAGCAGCAGCAGCCGGCGGCGGCAGCAGCGGCGGCGGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGGCGGCAGCGAGCGGCGGCAGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGGCAGCAGCGGCGGCAGCAGCAACAGCCCAGCGGCGGCGGCAGCAGCAGCAGTGGCCTGCGGCGGCAGCAGCGGCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCGGCAGCAGCAGCAGCGGCGGCAGTATAGGCAGCAGCAGCAGCGGCGGCGGCGAGCAGCGGCGGCAGCAGCGGCAACAGCAGCAGCGGCGGCGGCGGCAGCAGCAGTGGTGGCTGT	TR:VR	37:5	38:1
chr6	158435800	r_428_0	C	[chrX:68752597[GA	.	PASS	SVTYPE=BND;MATEID=r_428_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	73:22	54:0
chrX	68752597	r_428_1	A	[chr6:158435800[CA	.	PASS	SVTYPE=BND;MATEID=r_428_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	73:22	54:0
chr6	3001943	d_1772	C	<DEL>	.	PASS	END=3002004;SVTYPE=DEL;SVLEN=-61	TR:VR	64:14	26:0
chr6	57445913	r_379_0	C	C]chr6:64543639]	.	PASS	SVTYPE=BND;MATEID=r_379_1	TR:VR	149:18	62:0
chr6	64543639	r_379_1	T	T]chr6:57445913]	.	PASS	SVTYPE=BND;MATEID=r_379_0	TR:VR	149:18	62:0
chrX	115893554	r_542	A	<DUP>	.	PASS	END=135532119;SVTYPE=DUP;SVLEN=19638565	TR:VR	70:19	45:0
chrX	68484578	r_503	G	<DEL>	.	PASS	END=117869321;SVTYPE=DEL;SVLEN=-49384743	TR:VR	87:23	56:0
chr1	171963142	r_23_0	C	]chr6:58350978]C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_23_1	TR:VR	113:3	45:0
chr6	58350978	r_23_1	C	C[chr1:171963142[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_23_0	TR:VR	113:3	45:0
chr13	48099626	r_102	G	<DEL>	.	PASS	END=51079849;SVTYPE=DEL;SVLEN=-2980223	TR:VR	41:23	48:0
chr3	4267540	r_272	T	<DEL>	.	PASS	END=4280641;SVTYPE=DEL;SVLEN=-13101	TR:VR	100:11	37:0
chr6	159375948	r_429_0	T	TT[chrX:66947126[	.	PASS	SVTYPE=BND;MATEID=r_429_1;SVINSLEN=1;SVINSSEQ=T	TR:VR	67:21	58:0
chrX	66947126	r_429_1	G	]chr6:159375948]AG	.	PASS	SVTYPE=BND;MATEID=r_429_0;SVINSLEN=1;SVINSSEQ=A	TR:VR	67:21	58:0
chr6	30082896	r_338_0	G	[chr6:34153137[A	.	PASS	SVTYPE=BND;MATEID=r_338_1	TR:VR	109:29	49:0
chr6	34153137	r_338_1	A	[chr6:30082896[A	.	PASS	SVTYPE=BND;MATEID=r_338_0	TR:VR	109:29	49:0
chr6	57445949	r_380_0	G	]chrX:85149651]T	.	PASS	SVTYPE=BND;MATEID=r_380_1	TR:VR	131:30	56:0
chrX	85149651	r_380_1	T	T[chr6:57445949[	.	PASS	SVTYPE=BND;MATEID=r_380_0	TR:VR	131:30	56:0
chrX	68508212	r_504_0	C	C]chrX:82793085]	.	PASS	SVTYPE=BND;MATEID=r_504_1	TR:VR	52:19	50:0
chrX	82793085	r_504_1	T	T]chrX:68508212]	.	PASS	SVTYPE=BND;MATEID=r_504_0	TR:VR	52:19	50:0
chr13	48111851	r_103_0	T	]chr3:8769298]C	.	PASS	SVTYPE=BND;MATEID=r_103_1	TR:VR	86:19	50:0
chr3	8769298	r_103_1	C	C[chr13:48111851[	.	PASS	SVTYPE=BND;MATEID=r_103_0	TR:VR	86:19	50:0
chr17	58776255	r_161_0	A	]chr19:52340959]G	.	PASS	SVTYPE=BND;MATEID=r_161_1	TR:VR	163:50	57:0
chr19	52340959	r_161_1	G	G[chr17:58776255[	.	PASS	SVTYPE=BND;MATEID=r_161_0	TR:VR	163:50	57:0
chr18	49992777	r_176_0	G	G[chr6:65237778[	.	PASS	SVTYPE=BND;MATEID=r_176_1	TR:VR	115:19	51:0
chr6	65237778	r_176_1	T	]chr18:49992777]T	.	PASS	SVTYPE=BND;MATEID=r_176_0	TR:VR	115:19	51:0
chr20	31100878	d_1370	A	<INS>	.	Too_small_size;Too_low_VAF	END=31100871;SVTYPE=INS;SVINSLEN=28;SVINSSEQ=GTCACTGCAAGTGTAATGGAATGGAATG	TR:VR	132:5	38:1
chr3	157593244	d_1581	C	<DEL>	.	PASS	END=157593340;SVTYPE=DEL;SVLEN=-96	TR:VR	47:5	29:0
chr6	159444688	r_430_0	C	C]chrX:78575288]	.	PASS	SVTYPE=BND;MATEID=r_430_1	TR:VR	74:26	46:0
chrX	78575288	r_430_1	A	A]chr6:159444688]	.	PASS	SVTYPE=BND;MATEID=r_430_0	TR:VR	74:26	46:0
chr6	57457202	r_381_0	G	G]chr6:63942580]	.	PASS	SVTYPE=BND;MATEID=r_381_1	TR:VR	120:30	55:0
chr6	63942580	r_381_1	C	C]chr6:57457202]	.	PASS	SVTYPE=BND;MATEID=r_381_0	TR:VR	120:30	55:0
chr7	1280600	d_1821	A	<DEL>	.	PASS	END=1280935;SVTYPE=DEL;SVLEN=-335;SVINSLEN=11;SVINSSEQ=GGAAGAAGGAG	TR:VR	64:7	25:0
chrX	69631157	r_505_0	G	G]chrX:132739442]	.	PASS	SVTYPE=BND;MATEID=r_505_1	TR:VR	79:27	62:0
chrX	132739442	r_505_1	T	T]chrX:69631157]	.	PASS	SVTYPE=BND;MATEID=r_505_0	TR:VR	79:27	62:0
chr13	48139654	r_104	C	<DEL>	.	PASS	END=50798830;SVTYPE=DEL;SVLEN=-2659176	TR:VR	34:13	46:0
chr17	59353497	r_162_0	T	]chr19:55189461]C	.	PASS	SVTYPE=BND;MATEID=r_162_1	TR:VR	258:37	43:0
chr19	55189461	r_162_1	C	C[chr17:59353497[	.	PASS	SVTYPE=BND;MATEID=r_162_0	TR:VR	258:37	43:0
chr18	50269714	r_177_0	C	]chrX:105796546]T	.	PASS	SVTYPE=BND;MATEID=r_177_1	TR:VR	55:15	53:0
chrX	105796546	r_177_1	T	T[chr18:50269714[	.	PASS	SVTYPE=BND;MATEID=r_177_0	TR:VR	55:15	53:0
chr2	240159017	i_839	C	<INS>	.	PASS	END=240159017;SVTYPE=INS;SVINSLEN=515;SVINSSEQ=CCCCCCCATGGTACCTGCATCCTGGATGCATCTGAATGTGGGGTACACGTCACACACAGCCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACATGCACCCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACACAGCCCCCCACGGTACCACATCCTGATGCATCTGAATGTGGGGTACACGTCACACGCAGCCCCCCATGGCACCACATCCTGACGCATCTGAATGTGGGGTACACATCACACGCAGCTCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGGTACACGTCACACGCAGCTCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTAGACGTCACATGCAGCCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACACAGCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACATCACACGCAGCAC	TR:VR	36:8	34:0
chr3	16056228	r_273_0	C	[chr3:16056941[A	.	PASS	SVTYPE=BND;MATEID=r_273_1	TR:VR	74:49	22:0
chr3	16056941	r_273_1	A	[chr3:16056228[A	.	PASS	SVTYPE=BND;MATEID=r_273_0	TR:VR	74:49	22:0
chr6	57595382	r_382	T	<DUP>	.	PASS	END=60540952;SVTYPE=DUP;SVLEN=2945570	TR:VR	98:19	51:0
chr7	130072009	r_441_0	G	G[chrX:155463537[	.	PASS	SVTYPE=BND;MATEID=r_441_1	TR:VR	97:16	66:0
chrX	155463537	r_441_1	T	]chr7:130072009]T	.	PASS	SVTYPE=BND;MATEID=r_441_0	TR:VR	97:16	66:0
chr9	41230241	r_476_0	G	GCAGTGTGTATGGTGTCTGGGTTGTGTGTGTGCAGTGGGTGTGGTGTCTGGGGTGTGTATGCAGTGTGTGCGGTGTCTGTGTGTGGGGTGTGTATATGTGTGT[chrX:113990610[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_476_1;SVINSLEN=102;SVINSSEQ=CAGTGTGTATGGTGTCTGGGTTGTGTGTGTGCAGTGGGTGTGGTGTCTGGGGTGTGTATGCAGTGTGTGCGGTGTCTGTGTGTGGGGTGTGTATATGTGTGT	TR:VR	139:4	97:0
chrX	113990610	r_476_1	G	]chr9:41230241]ACACACATATACACACCCCACACACAGACACCGCACACACTGCATACACACCCCAGACACCACACCCACTGCACACACACAACCCAGACACCATACACACTGG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_476_0;SVINSLEN=102;SVINSSEQ=ACACACATATACACACCCCACACACAGACACCGCACACACTGCATACACACCCCAGACACCACACCCACTGCACACACACAACCCAGACACCATACACACTG	TR:VR	139:4	97:0
chrX	70584122	r_506_0	A	[chrX:85076625[A	.	PASS	SVTYPE=BND;MATEID=r_506_1	TR:VR	59:24	49:0
chrX	85076625	r_506_1	A	[chrX:70584122[A	.	PASS	SVTYPE=BND;MATEID=r_506_0	TR:VR	59:24	49:0
chr1	172106049	r_26_0	T	]chr6:58367602]A	.	PASS	SVTYPE=BND;MATEID=r_26_1	TR:VR	124:12	51:0
chr6	58367602	r_26_1	A	A[chr1:172106049[	.	PASS	SVTYPE=BND;MATEID=r_26_0	TR:VR	124:12	51:0
chr10	322149	d_327	G	<DEL>	.	PASS	END=322469;SVTYPE=DEL;SVLEN=-320;SVINSLEN=26;SVINSSEQ=AACAGTCAGTCGGGGGTGCGGGGCTC	TR:VR	78:14	18:0
chr13	49061321	r_105_0	T	]chr8:35509511]CCCCTCCCTTCCCCCTCTCCCCTCCCCTCCCTTCCCCTCTCCCCTCCCCTGCCTTCCCCTCTCTCCTCCCCTCTCTCTCCTCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCTCTCCCCCCTTCCCTCCCCTTGCCTCC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_105_1;SVINSLEN=162;SVINSSEQ=CCCCTCCCTTCCCCCTCTCCCCTCCCCTCCCTTCCCCTCTCCCCTCCCCTGCCTTCCCCTCTCTCCTCCCCTCTCTCTCCTCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCTCTCCCCCCTTCCCTCCCCTTGCCTC	TR:VR	147:3	85:0
chr8	35509511	r_105_1	C	CGAGGCAAGGGGAGGGAAGGGGGGAGAGAGGGGAGGGGAGAGGAGAGGGGAGGGGAGGGGAGAGGAGAGGGGAGGGGAGGGGAGGAGAGAGAGGGGAGGAGAGAGGGGAAGGCAGGGGAGGGGAGAGGGGAAGGGAGGGGAGGGGAGAGGGGGAAGGGAGGGG[chr13:49061321[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_105_0;SVINSLEN=162;SVINSSEQ=GAGGCAAGGGGAGGGAAGGGGGGAGAGAGGGGAGGGGAGAGGAGAGGGGAGGGGAGGGGAGAGGAGAGGGGAGGGGAGGGGAGGAGAGAGAGGGGAGGAGAGAGGGGAAGGCAGGGGAGGGGAGAGGGGAAGGGAGGGGAGGGGAGAGGGGGAAGGGAGGGG	TR:VR	147:3	85:0
chr17	21399780	r_143_0	A	]chr9:61669200]G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_143_1	TR:VR	62:3	53:0
chr9	61669200	r_143_1	G	G[chr17:21399780[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_143_0	TR:VR	62:3	53:0
chr17	59569698	d_1038	A	<DEL>	.	Too_small_size	END=59569736;SVTYPE=DEL;SVLEN=-38	TR:VR	126:12	32:0
chr18	5087413	d_1086	T	<DEL>	.	PASS	END=5087614;SVTYPE=DEL;SVLEN=-201	TR:VR	59:11	25:0
chr19	54380323	r_200	A	<DEL>	.	PASS	END=54988736;SVTYPE=DEL;SVLEN=-608413	TR:VR	206:55	39:0
chr3	16056440	r_274	T	<DEL>	.	PASS	END=30803733;SVTYPE=DEL;SVLEN=-14747293;SVINSLEN=42;SVINSSEQ=AAAATGTTTTCTCTGGACATCTGAGCATCTTCTCTATATTCA	TR:VR	158:50	41:0
chr3	48213527	r_276_0	A	A]chr8:91066615]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_276_1	TR:VR	146:5	60:0
chr8	91066615	r_276_1	T	T]chr3:48213527]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_276_0	TR:VR	146:5	60:0
chr6	58026413	r_383_0	T	]chrX:79809686]A	.	PASS	SVTYPE=BND;MATEID=r_383_1	TR:VR	76:18	67:0
chrX	79809686	r_383_1	A	A[chr6:58026413[	.	PASS	SVTYPE=BND;MATEID=r_383_0	TR:VR	76:18	67:0
chr7	130854058	r_442_0	A	]chr9:114730834]G	.	PASS	SVTYPE=BND;MATEID=r_442_1	TR:VR	65:28	56:0
chr9	114730834	r_442_1	G	G[chr7:130854058[	.	PASS	SVTYPE=BND;MATEID=r_442_0	TR:VR	65:28	56:0
chrX	73258022	r_507_0	G	[chrX:106290721[G	.	PASS	SVTYPE=BND;MATEID=r_507_1	TR:VR	87:18	52:0
chrX	106290721	r_507_1	G	[chrX:73258022[G	.	PASS	SVTYPE=BND;MATEID=r_507_0	TR:VR	87:18	52:0
chr1	172114512	r_27_0	A	A]chrX:104099538]	.	PASS	SVTYPE=BND;MATEID=r_27_1	TR:VR	104:9	52:0
chrX	104099538	r_27_1	T	T]chr1:172114512]	.	PASS	SVTYPE=BND;MATEID=r_27_0	TR:VR	104:9	52:0
chr10	322149	d_328	G	<DEL>	.	PASS	END=322716;SVTYPE=DEL;SVLEN=-567;SVINSLEN=28;SVINSSEQ=AACAGTCAGTCGGGGGTGCGGGGCTCCG	TR:VR	79:18	18:0
chr10	43322768	r_64	G	<DEL>	.	PASS	END=43504859;SVTYPE=DEL;SVLEN=-182091	TR:VR	80:24	39:0
chr12	12875245	r_83	C	<DUP>	.	PASS	END=13218729;SVTYPE=DUP;SVLEN=343484	TR:VR	128:11	63:0
chr12	58969659	d_534	G	<DEL>	.	Too_small_size	END=58969701;SVTYPE=DEL;SVLEN=-42	TR:VR	68:10	22:0
chr13	49061726	i_289	C	<INS>	.	PASS	END=49061726;SVTYPE=INS;SVINSLEN=304;SVINSSEQ=CCTTCCCCTCCTCTCCCCTCCCCTCCTCCTCCCCTCCCCTCCCCTCTCTCTCTTCCTCCTTTCCTTGGAGTCTCCCTCTCTCGCCCAGCCTGGACTGTACTGGCTCTATCTCAGCTCACTGCAACCTCTCCTCCTCTCTCCTCTGAATTCTCCTGCCTCAGCCTCTCGAGTGCCTGGGATTCCAGGCACTCGCTACCACTCCCCTCCCTCCTCCTCCCCGCCTCCCCCTCTCCTCTCCCCTCTCCTCCCTCCCTCTCCTCCCCTCCCCTCTCCTCCCCTCCTCTCCTCCCCTCCCCCTCTCCTC	TR:VR	54:4	60:1
chr17	60270638	r_163_0	A	[chr21:8219996[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_163_1	TR:VR	635:6	522:0
chr21	8219996	r_163_1	T	[chr17:60270638[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_163_0	TR:VR	635:6	522:0
chr18	5088129	r_169_0	T	T[chrX:82069000[	.	PASS	SVTYPE=BND;MATEID=r_169_1	TR:VR	81:11	47:0
chrX	82069000	r_169_1	T	]chr18:5088129]T	.	PASS	SVTYPE=BND;MATEID=r_169_0	TR:VR	81:11	47:0
chr19	54381333	r_201_0	T	T]chr21:18872386]	.	PASS	SVTYPE=BND;MATEID=r_201_1	TR:VR	109:26	47:0
chr21	18872386	r_201_1	T	T]chr19:54381333]	.	PASS	SVTYPE=BND;MATEID=r_201_0	TR:VR	109:26	47:0
chr3	51857063	r_277_0	A	ATCCGAACATCAGAAGGAACAAACTCCAGACACACCATCTTTAAGAACTGTAACATTCACTGCAAGGGTCCGTGGCTTCACTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACATA[chr4:103456373[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_277_1;SVINSLEN=123;SVINSSEQ=TCCGAACATCAGAAGGAACAAACTCCAGACACACCATCTTTAAGAACTGTAACATTCACTGCAAGGGTCCGTGGCTTCACTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACATA	TR:VR	79:3	63:1
chr4	103456373	r_277_1	A	]chr3:51857063]TATGTCCAGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAGTGAAGCCACGGACCCTTGCAGTGAATGTTACAGTTCTTAAAGATGGTGTGTCTGGAGTTTGTTCCTTCTGATGTTCGGAA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_277_0;SVINSLEN=123;SVINSSEQ=TATGTCCAGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAGTGAAGCCACGGACCCTTGCAGTGAATGTTACAGTTCTTAAAGATGGTGTGTCTGGAGTTTGTTCCTTCTGATGTTCGGA	TR:VR	79:3	63:1
chr9	43194184	i_1534	T	<INS>	.	PASS	END=43194184;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=AAGGTGGGAAAGGAAATATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTTCTTTGGGATGTTTACATTCAACTGACAGAGTTGAACCTTTTTTTTGATAGAGCAGTTTTGAAACACTCTTCTCATAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGACTTCATTGGAAACTGGAATATCTTCACATAAACACTAGACAGAATTATTCTCAGAAACTTCTTTGTAATGTGTGCATTCAACTCACAGAGTTGAACCTCTCTTTTTGTTACAGGAGTTTTGAAACACACTTTTTGCAGAATCTGCAAGTGGACATTTGGAGCGCCTTGAGGTCT	TR:VR	65:9	36:1
chrX	73530639	r_508_0	A	[chrX:100150752[C	.	PASS	SVTYPE=BND;MATEID=r_508_1	TR:VR	48:7	51:0
chrX	100150752	r_508_1	C	[chrX:73530639[C	.	PASS	SVTYPE=BND;MATEID=r_508_0	TR:VR	48:7	51:0
chr1	172421877	r_28_0	A	A]chr1:172470137]	.	PASS	SVTYPE=BND;MATEID=r_28_1	TR:VR	102:8	58:0
chr1	172470137	r_28_1	T	T]chr1:172421877]	.	PASS	SVTYPE=BND;MATEID=r_28_0	TR:VR	102:8	58:0
chr10	322198	d_329	G	<DEL>	.	Too_low_VAF	END=322275;SVTYPE=DEL;SVLEN=-77;SVINSLEN=27;SVINSSEQ=AACAGTCAGTCGGGGGTGCGGGGCCCG	TR:VR	76:3	18:0
chr13	50851500	r_106_0	T	T[chr3:9914066[	.	PASS	SVTYPE=BND;MATEID=r_106_1	TR:VR	85:12	53:0
chr3	9914066	r_106_1	T	]chr13:50851500]T	.	PASS	SVTYPE=BND;MATEID=r_106_0	TR:VR	85:12	53:0
chr17	21843237	d_1014	C	<INS>	.	Too_low_VAF	END=21843340;SVTYPE=INS;SVINSLEN=128;SVINSSEQ=GCCGTTTTTTCCCCCGCCGCCGCGGCTTTTTGCAGCTTTTTGTCCCCGCCACCATGGGTTTTGCCGATGCGGCTTTTTGACCCCACCGCCAGGGCTTTTGTTCCCACCTCGCGGCGGCTTACGTGCCT	TR:VR	100:4	68:1
chr20	7033871	i_854	T	<INS>	.	PASS	END=7033871;SVTYPE=INS;SVINSLEN=96;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCA	TR:VR	48:18	29:0
chr1	172422072	r_29_0	A	[chr1:177241638[A	.	PASS	SVTYPE=BND;MATEID=r_29_1	TR:VR	112:6	51:0
chr1	177241638	r_29_1	A	[chr1:172422072[A	.	PASS	SVTYPE=BND;MATEID=r_29_0	TR:VR	112:6	51:0
chr5	181142235	r_315_0	A	ACCAAGAATATCCTCTGCATTCCTG[chrX:106053992[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_315_1;SVINSLEN=24;SVINSSEQ=CCAAGAATATCCTCTGCATTCCTG	TR:VR	86:3	57:0
chrX	106053992	r_315_1	T	]chr5:181142235]CAGGAATGCAGAGGATATTCTTGGT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_315_0;SVINSLEN=24;SVINSSEQ=CAGGAATGCAGAGGATATTCTTGG	TR:VR	86:3	57:0
chrX	75536375	r_509_0	C	[chrX:84036524[C	.	PASS	SVTYPE=BND;MATEID=r_509_1	TR:VR	54:16	66:0
chrX	84036524	r_509_1	C	[chrX:75536375[C	.	PASS	SVTYPE=BND;MATEID=r_509_0	TR:VR	54:16	66:0
chr1	174964800	r_30_0	A	A[chr6:58236922[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_30_1	TR:VR	103:4	51:0
chr6	58236922	r_30_1	G	]chr1:174964800]G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_30_0	TR:VR	103:4	51:0
chr20	28869189	i_871	A	<INS>	.	PASS	END=28869190;SVTYPE=INS;SVINSLEN=170;SVINSSEQ=AATTTTTGAGGTAAATGCACACATCAGAAAGAAGTTTCTCAGAAATCTGTCTAGTTTTTATGTGAAGATATTTCCTTTTCCATCATAGGCCTCAAAGCACTCCAAACGTCTACTTGCTGATTCTTCAAAAAGAGAGTTTCAAAATTGCTCAATAAAAAGACAATTTTAAC	TR:VR	182:11	107:1
chr5	181439338	r_316_0	T	]chrUn_KI270748v1:69155]G	.	PASS	SVTYPE=BND;MATEID=r_316_1	TR:VR	57:8	35:1
chrUn_KI270748v1	69155	r_316_1	G	G[chr5:181439338[	.	PASS	SVTYPE=BND;MATEID=r_316_0	TR:VR	57:8	35:1
chrX	126106652	r_543	G	<DEL>	.	PASS	END=126124155;SVTYPE=DEL;SVLEN=-17503;SVINSLEN=1;SVINSSEQ=T	TR:VR	42:5	44:0
chrX	77118198	r_510_0	T	[chrX:77694420[G	.	PASS	SVTYPE=BND;MATEID=r_510_1	TR:VR	53:21	66:0
chrX	77694420	r_510_1	G	[chrX:77118198[G	.	PASS	SVTYPE=BND;MATEID=r_510_0	TR:VR	53:21	66:0
chr1	177311709	r_31	C	<DUP>	.	PASS	END=181793897;SVTYPE=DUP;SVLEN=4482188	TR:VR	114:6	53:0
chr13	70298277	d_567	A	<DEL>	.	PASS	END=70298339;SVTYPE=DEL;SVLEN=-62	TR:VR	38:6	30:0
chr17	60280505	r_165_0	G	G]chr17:60979326]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_165_1	TR:VR	252:12	57:0
chr17	60979326	r_165_1	A	A]chr17:60280505]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_165_0	TR:VR	252:12	57:0
chr18	57845021	i_579	G	<INS>	.	PASS	END=57845021;SVTYPE=INS;SVINSLEN=54;SVINSSEQ=AGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	TR:VR	44:3	23:0
chr2	90392400	d_1230	A	<INS>	.	Too_small_size;Too_low_VAF	END=90392412;SVTYPE=INS;SVINSLEN=12;SVINSSEQ=ATCATTGAATGG	TR:VR	447:4	290:1
chr20	61282887	i_916	A	<INS>	.	PASS	END=61282887;SVTYPE=INS;SVINSLEN=199;SVINSSEQ=TTTGCACGCATGTGCTGTGCTGTGTGTGTGATGTACGTGCATTTGCACGCGTGTGCTGTGTGTGTGTGATGTACGTGCGTTTGCACACGCGTGTGCTGTGGCGTGTGTGATGTACGTGCGTTTGCACGCGTGTGCTGTGGCGTGTGTGATGTACGTGCGTTTGCACGCGTGTGCTGTGGCGTGTGTGATGTACGTGTGT	TR:VR	68:6	21:0
chr5	181449234	d_1770	G	<DEL>	.	Too_low_VAF	END=181451376;SVTYPE=DEL;SVLEN=-2142;SVINSLEN=27;SVINSSEQ=TCGCAGTTTCCACACCGTGAGCTGCTG	TR:VR	70:3	50:1
chrX	78025847	r_511_0	T	T]chrX:79223052]	.	PASS	SVTYPE=BND;MATEID=r_511_1	TR:VR	41:23	65:0
chrX	79223052	r_511_1	G	G]chrX:78025847]	.	PASS	SVTYPE=BND;MATEID=r_511_0	TR:VR	41:23	65:0
chr10	53922271	r_65_0	T	]chr20:48852172]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_65_1	TR:VR	219:8	55:0
chr20	48852172	r_65_1	T	T[chr10:53922271[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_65_0	TR:VR	219:8	55:0
chr11	1670934	i_202	A	<INS>	.	PASS	END=1670936;SVTYPE=INS;SVINSLEN=119;SVINSSEQ=GTGTGGATAGTGTGGGTAGTGTGGGCAGTGTGGGTTGGTGTGGGCAGTGTGGGCAGTGTGGATAGTGTGGGCAGTGTGGGTAGTGTGGGTAGTGTGGGTAGTGTGGGCAGTGGGCAGTG	TR:VR	34:4	33:0
chr12	70891613	r_86	A	<DUP>	.	PASS	END=70893180;SVTYPE=DUP;SVLEN=1567	TR:VR	54:3	23:0
chr17	60644600	r_166_0	A	A[chr19:17781588[	.	PASS	SVTYPE=BND;MATEID=r_166_1	TR:VR	233:31	46:0
chr19	17781588	r_166_1	C	]chr17:60644600]C	.	PASS	SVTYPE=BND;MATEID=r_166_0	TR:VR	233:31	46:0
chrX	78503811	r_512_0	C	[chrX:85100427[A	.	PASS	SVTYPE=BND;MATEID=r_512_1	TR:VR	47:21	71:0
chrX	85100427	r_512_1	A	[chrX:78503811[A	.	PASS	SVTYPE=BND;MATEID=r_512_0	TR:VR	47:21	71:0
chr1	181793645	r_32_0	G	[chr1:181793867[A	.	PASS	SVTYPE=BND;MATEID=r_32_1	TR:VR	61:6	24:0
chr1	181793867	r_32_1	A	[chr1:181793645[A	.	PASS	SVTYPE=BND;MATEID=r_32_0	TR:VR	61:6	24:0
chr10	59497726	r_66_0	A	[chr10:59498262[T	.	PASS	SVTYPE=BND;MATEID=r_66_1	TR:VR	82:32	20:0
chr10	59498262	r_66_1	T	[chr10:59497726[T	.	PASS	SVTYPE=BND;MATEID=r_66_0	TR:VR	82:32	20:0
chr11	16887304	r_77_0	T	]chrY:10157947]GCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCTCTCCTCACGGT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_77_1;SVINSLEN=45;SVINSSEQ=GCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCTCTCCTCACGG	TR:VR	123:3	74:0
chrY	10157947	r_77_1	T	TCCGTGAGGAGAGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGC[chr11:16887304[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_77_0;SVINSLEN=45;SVINSSEQ=CCGTGAGGAGAGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGC	TR:VR	123:3	74:0
chr17	60662275	d_1039	G	<DEL>	.	PASS	END=60662484;SVTYPE=DEL;SVLEN=-209;SVINSLEN=24;SVINSSEQ=CTGACGTCAGCCACCGTGCCCAGC	TR:VR	181:32	28:0
chr7	142450120	r_443	G	<DUP>	.	Too_low_VAF	END=142526501;SVTYPE=DUP;SVLEN=76381	TR:VR	102:3	70:1
chr9	4765840	d_1964	A	<DEL>	.	PASS	END=4765891;SVTYPE=DEL;SVLEN=-51	TR:VR	42:13	27:0
chrX	78524263	r_513	C	<DEL>	.	PASS	END=93825452;SVTYPE=DEL;SVLEN=-15301189	TR:VR	76:29	53:0
chr10	33511245	r_62_0	A	[chr5:33633230[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_62_1	TR:VR	137:3	75:1
chr5	33633230	r_62_1	G	[chr10:33511245[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_62_0	TR:VR	137:3	75:1
chr18	62694105	r_178_0	T	T[chr6:60323774[	.	PASS	SVTYPE=BND;MATEID=r_178_1	TR:VR	83:13	52:0
chr6	60323774	r_178_1	T	]chr18:62694105]T	.	PASS	SVTYPE=BND;MATEID=r_178_0	TR:VR	83:13	52:0
chr20	28923898	i_873	C	<INS>	.	PASS	END=28923898;SVTYPE=INS;SVINSLEN=161;SVINSSEQ=TACCAAAACAGTATTTCAAAACTGCTCAATCAAAAGAATGGTTCAACTCTGTGAGATGAATGCACACATCACAAAGAAGTATCACAGAATGCTTCTGTGAATACATATTTCGTTTTCCACCATAGGCCTCAAAGTGCTACAAATATCCACTGGCACACTGT	TR:VR	45:4	26:0
chr6	168932656	r_431_0	A	[chrX:125545498[CACTGGAAG	.	PASS	SVTYPE=BND;MATEID=r_431_1;SVINSLEN=8;SVINSSEQ=CACTGGAA	TR:VR	56:17	59:0
chrX	125545498	r_431_1	G	[chr6:168932656[TTCCAGTGG	.	PASS	SVTYPE=BND;MATEID=r_431_0;SVINSLEN=8;SVINSSEQ=TTCCAGTG	TR:VR	56:17	59:0
chr8	76368591	r_452_0	C	[chr8:78574688[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_452_1	TR:VR	211:5	67:0
chr8	78574688	r_452_1	T	[chr8:76368591[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_452_0	TR:VR	211:5	67:0
chrX	78556443	r_514	A	<DEL>	.	PASS	END=84042123;SVTYPE=DEL;SVLEN=-5485680	TR:VR	100:25	55:0
chr10	36233403	r_63	A	<DEL>	.	PASS	END=37034252;SVTYPE=DEL;SVLEN=-800849;SVINSLEN=39;SVINSSEQ=GGGACAATTTTACATCTTTATTTCTTATTTTGGTGTCTT	TR:VR	118:9	43:0
chr10	59903538	r_67_0	G	G]chrX:149992068]	.	PASS	SVTYPE=BND;MATEID=r_67_1	TR:VR	122:22	58:0
chrX	149992068	r_67_1	A	A]chr10:59903538]	.	PASS	SVTYPE=BND;MATEID=r_67_0	TR:VR	122:22	58:0
chr12	79787513	r_87	A	<DEL>	.	PASS	END=79796564;SVTYPE=DEL;SVLEN=-9051	TR:VR	77:13	37:0
chr14_GL000225v1_random	120978	d_873	T	<DEL>	.	Too_low_VAF	END=121259;SVTYPE=DEL;SVLEN=-281;SVINSLEN=6;SVINSSEQ=ATCTCT	TR:VR	853:3	825:1
chr19	55032871	i_671	G	<INS>	.	Too_low_VAF	END=55032871;SVTYPE=INS;SVINSLEN=54;SVINSSEQ=TTCGCAGTTAGGACACGGTTGACCTGCTCGTGTTAGACACGGTGGGCTCCTGTT	TR:VR	98:3	33:0
chr7	5706126	r_434_0	A	A]chrX:125388067]	.	PASS	SVTYPE=BND;MATEID=r_434_1	TR:VR	49:16	55:0
chrX	125388067	r_434_1	C	C]chr7:5706126]	.	PASS	SVTYPE=BND;MATEID=r_434_0	TR:VR	49:16	55:0
chrX	78556504	r_515_0	T	[chrX:135533506[A	.	PASS	SVTYPE=BND;MATEID=r_515_1	TR:VR	75:19	44:0
chrX	135533506	r_515_1	A	[chrX:78556504[A	.	PASS	SVTYPE=BND;MATEID=r_515_0	TR:VR	75:19	44:0
chr1	192658930	r_33	C	<DUP>	.	PASS	END=193018712;SVTYPE=DUP;SVLEN=359782	TR:VR	143:10	38:0
chr6	60541323	r_384_0	G	[chrX:85852562[C	.	PASS	SVTYPE=BND;MATEID=r_384_1	TR:VR	93:27	50:0
chrX	85852562	r_384_1	C	[chr6:60541323[C	.	PASS	SVTYPE=BND;MATEID=r_384_0	TR:VR	93:27	50:0
chr8	130049651	d_1934	G	<INS>	.	Too_small_size	END=130049640;SVTYPE=INS;SVINSLEN=31;SVINSSEQ=GGGAACACATGGAGGGCAGAGGGGAACACAT	TR:VR	95:9	22:0
chr8	76687708	r_453	A	<DEL>	.	PASS	END=86458921;SVTYPE=DEL;SVLEN=-9771213	TR:VR	203:12	56:0
chrX	78884083	r_516_0	C	[chrX:138794955[T	.	PASS	SVTYPE=BND;MATEID=r_516_1	TR:VR	77:21	78:0
chrX	138794955	r_516_1	T	[chrX:78884083[T	.	PASS	SVTYPE=BND;MATEID=r_516_0	TR:VR	77:21	78:0
chr11	20975920	i_209	C	<INS>	.	PASS	END=20975920;SVTYPE=INS;SVINSLEN=67;SVINSSEQ=ACATATATGTACATATATGTGTACATATATGTACATATATGTGTACATATATGTACATTTATGTGTA	TR:VR	25:5	30:0
chr17	68901303	i_514	A	<INS>	.	PASS	END=68901303;SVTYPE=INS;SVINSLEN=60;SVINSSEQ=ATCCATTTTTTCAAAAGAAAACAGACATTTCTACAAAGAAGGTGTACAATTGACGAGTTA	TR:VR	75:26	28:0
chr6	60551062	r_385	C	<DEL>	.	PASS	END=60771215;SVTYPE=DEL;SVLEN=-220153	TR:VR	117:26	57:0
chr8	78566128	r_454_0	A	[chr8:78566320[G	.	PASS	SVTYPE=BND;MATEID=r_454_1	TR:VR	109:10	35:0
chr8	78566320	r_454_1	G	[chr8:78566128[G	.	PASS	SVTYPE=BND;MATEID=r_454_0	TR:VR	109:10	35:0
chrX	137256898	r_544	A	<DEL>	.	PASS	END=139690561;SVTYPE=DEL;SVLEN=-2433663	TR:VR	155:26	52:0
chr1	19385651	r_3_0	G	[chr7:107567344[G	.	PASS	SVTYPE=BND;MATEID=r_3_1	TR:VR	73:9	66:0
chr7	107567344	r_3_1	G	[chr1:19385651[G	.	PASS	SVTYPE=BND;MATEID=r_3_0	TR:VR	73:9	66:0
chr12	82123396	r_88	A	<DEL>	.	PASS	END=82385749;SVTYPE=DEL;SVLEN=-262353	TR:VR	97:8	55:0
chr20	39370877	r_238	A	<DUP>	.	Too_low_VAF	END=53291970;SVTYPE=DUP;SVLEN=13921093	TR:VR	225:8	69:0
chr6	60592552	r_386_0	T	T[chrX:82826272[	.	PASS	SVTYPE=BND;MATEID=r_386_1	TR:VR	85:25	46:0
chrX	82826272	r_386_1	T	]chr6:60592552]T	.	PASS	SVTYPE=BND;MATEID=r_386_0	TR:VR	85:25	46:0
chr8	78572429	r_455_0	C	C]chr8:86681211]	.	PASS	SVTYPE=BND;MATEID=r_455_1	TR:VR	199:12	62:0
chr8	86681211	r_455_1	T	T]chr8:78572429]	.	PASS	SVTYPE=BND;MATEID=r_455_0	TR:VR	199:12	62:0
chrX	138516659	r_545	C	<DUP>	.	PASS	END=139648004;SVTYPE=DUP;SVLEN=1131345	TR:VR	88:7	53:0
chrX	79599124	r_517	G	<DUP>	.	PASS	END=104495695;SVTYPE=DUP;SVLEN=24896571	TR:VR	59:21	60:0
chr1	198388220	r_34_0	A	A[chr3:111242806[	.	PASS	SVTYPE=BND;MATEID=r_34_1	TR:VR	102:16	56:0
chr3	111242806	r_34_1	A	]chr1:198388220]A	.	PASS	SVTYPE=BND;MATEID=r_34_0	TR:VR	102:16	56:0
chr10	61461684	r_69	C	<DUP>	.	Too_low_VAF	END=62414968;SVTYPE=DUP;SVLEN=953284	TR:VR	172:6	62:0
chr17_KI270730v1_random	104885	d_1082	A	<DEL>	.	Too_low_VAF	END=104993;SVTYPE=DEL;SVLEN=-108;SVINSLEN=18;SVINSSEQ=ATGGTATGGAGTGGAATG	TR:VR	237:5	118:0
chr19	29901781	r_188_0	T	TC]chr4:156152033]	.	PASS	SVTYPE=BND;MATEID=r_188_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	103:6	62:0
chr4	156152033	r_188_1	A	AG]chr19:29901781]	.	PASS	SVTYPE=BND;MATEID=r_188_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	103:6	62:0
chr20	39792495	r_239	A	<DUP>	.	PASS	END=64243226;SVTYPE=DUP;SVLEN=24450731	TR:VR	115:22	54:0
chr3	75669598	r_278_0	C	CT[chr4:190176191[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_278_1;SVINSLEN=1;SVINSSEQ=T	TR:VR	250:4	169:1
chr4	190176191	r_278_1	G	]chr3:75669598]AG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_278_0;SVINSLEN=1;SVINSSEQ=A	TR:VR	250:4	169:1
chr6	60969834	r_387_0	A	A]chr6:65196909]	.	PASS	SVTYPE=BND;MATEID=r_387_1	TR:VR	98:31	45:0
chr6	65196909	r_387_1	A	A]chr6:60969834]	.	PASS	SVTYPE=BND;MATEID=r_387_0	TR:VR	98:31	45:0
chr8	144573947	r_475	C	<DUP>	.	Too_low_VAF	END=144588765;SVTYPE=DUP;SVLEN=14818	TR:VR	117:5	40:0
chrX	139335687	r_546	C	<DUP>	.	PASS	END=151148508;SVTYPE=DUP;SVLEN=11812821;SVINSLEN=7;SVINSSEQ=AAATGTA	TR:VR	104:9	53:0
chr1	2664477	d_14	C	<DEL>	.	Too_low_VAF	END=2664570;SVTYPE=DEL;SVLEN=-93;SVINSLEN=12;SVINSSEQ=CCACAACCCCAG	TR:VR	265:4	167:0
chr20	39792696	r_240	T	<DEL>	.	PASS	END=43758636;SVTYPE=DEL;SVLEN=-3965940	TR:VR	158:22	49:0
chr21	10792680	i_1010	C	<INS>	.	Too_low_VAF	END=10792680;SVTYPE=INS;SVINSLEN=528;SVINSSEQ=TATTGATTGTGCATTTTTTATACACTTCTTTTGTAGAATCTGCAGTTGCTATTTGGAGCCCTTTGCCGGGCCAATGGTGAAAAGGTACTAACCTTCTCATAAAAGGTAGACAGAAACATTTTGACAAACTTCTCTGTGATGTGTGCATTCATCTACACAGAGTTGAACCATTTTAGATCGACAGCAGTTTTGAAACACTATCAAAGTTTGTAGGATATCTGCAAGTGCATATTTAGATACCATTGCAGCCAACCTATGGTGGAAAAGCAAATATCTTCACATAAACACTAGACAGAAGCATTCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACAGACTTGAAACTTTTCTTTTCATTCAGCAGTTTGGAAACAGTATTTTTCTAGAATCTGCAAAGGGATACTTCTTGGAACACTTTAGAGCCTATGGTGGAATTGGCCTAAATAGGTCAAAAACTACGGAGAAGCATTCTGAGAAACTTCATTGAGATGTATGCCTTCATCTCACAGAGTTGAACCTTACT	TR:VR	294:4	167:0
chr6	31429837	i_1339	A	<INS>	.	Too_low_VAF	END=31429837;SVTYPE=INS;SVINSLEN=90;SVINSSEQ=TATATATTCTATATATCTATTCTATATATATATATATATATATATATTCTATATATATATCTATATATATTCTATATGTTTCTATATTCT	TR:VR	128:3	83:1
chr6	61175503	r_388_0	T	T]chr6:62847945]	.	PASS	SVTYPE=BND;MATEID=r_388_1	TR:VR	115:13	45:0
chr6	62847945	r_388_1	A	A]chr6:61175503]	.	PASS	SVTYPE=BND;MATEID=r_388_0	TR:VR	115:13	45:0
chr9	94196806	r_477_0	T	]chrX:116146892]ATTTTTCAACTATTACATCAATAAATT	.	PASS	SVTYPE=BND;MATEID=r_477_1;SVINSLEN=26;SVINSSEQ=ATTTTTCAACTATTACATCAATAAAT	TR:VR	51:17	45:0
chrX	116146892	r_477_1	T	TATTTATTGATGTAATAGTTGAAAAAT[chr9:94196806[	.	PASS	SVTYPE=BND;MATEID=r_477_0;SVINSLEN=26;SVINSSEQ=ATTTATTGATGTAATAGTTGAAAAAT	TR:VR	51:17	45:0
chrX	139336935	r_547_0	T	TC]chrX:142039963]	.	PASS	SVTYPE=BND;MATEID=r_547_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	123:17	56:0
chrX	142039963	r_547_1	G	GG]chrX:139336935]	.	PASS	SVTYPE=BND;MATEID=r_547_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	123:17	56:0
chr19	55851269	i_674	A	<INS>	.	Too_low_VAF	END=55851269;SVTYPE=INS;SVINSLEN=390;SVINSSEQ=CGGTGAATTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGTGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATTCCCGAGGCTGCGGTGTGTAATTCCCGAGGCTGCGGTGTAATTCCCCGAGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATTTACGAGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCC	TR:VR	100:4	28:0
chr20	40982734	r_241_0	T	[chr20:46616823[TGACAATGCATTCAAATTCACCAGATCACCCCCAGCTCTGAAGATGACAATGCATTCAAATTCACCAGATCACCCCCAGCTCTGAAGATGACAATGCATTCAAATTCACCAGATCACCCCCAGCTCTGAAGATGACAATGCATTCAAATTCACCAGATCACCCCCAGCTCTGAAGATGACAATGCATTCAAATTCACCAGAT	.	PASS	SVTYPE=BND;MATEID=r_241_1;SVINSLEN=201;SVINSSEQ=TGACAATGCATTCAAATTCACCAGATCACCCCCAGCTCTGAAGATGACAATGCATTCAAATTCACCAGATCACCCCCAGCTCTGAAGATGACAATGCATTCAAATTCACCAGATCACCCCCAGCTCTGAAGATGACAATGCATTCAAATTCACCAGATCACCCCCAGCTCTGAAGATGACAATGCATTCAAATTCACCAGA	TR:VR	324:63	63:0
chr20	46616823	r_241_1	T	[chr20:40982734[TCTGGTGAATTTGAATGCATTGTCATCTTCAGAGCTGGGGGTGATCTGGTGAATTTGAATGCATTGTCATCTTCAGAGCTGGGGGTGATCTGGTGAATTTGAATGCATTGTCATCTTCAGAGCTGGGGGTGATCTGGTGAATTTGAATGCATTGTCATCTTCAGAGCTGGGGGTGATCTGGTGAATTTGAATGCATTGTCAT	.	PASS	SVTYPE=BND;MATEID=r_241_0;SVINSLEN=201;SVINSSEQ=TCTGGTGAATTTGAATGCATTGTCATCTTCAGAGCTGGGGGTGATCTGGTGAATTTGAATGCATTGTCATCTTCAGAGCTGGGGGTGATCTGGTGAATTTGAATGCATTGTCATCTTCAGAGCTGGGGGTGATCTGGTGAATTTGAATGCATTGTCATCTTCAGAGCTGGGGGTGATCTGGTGAATTTGAATGCATTGTCA	TR:VR	324:63	63:0
chr6	32264488	r_339	A	<DEL>	.	PASS	END=61024291;SVTYPE=DEL;SVLEN=-28759803	TR:VR	89:26	37:0
chr6	61222519	r_389_0	A	A[chr9:112856693[	.	PASS	SVTYPE=BND;MATEID=r_389_1	TR:VR	136:32	54:0
chr9	112856693	r_389_1	T	]chr6:61222519]T	.	PASS	SVTYPE=BND;MATEID=r_389_0	TR:VR	136:32	54:0
chr9	94802319	r_478_0	T	[chr9:97165128[A	.	PASS	SVTYPE=BND;MATEID=r_478_1	TR:VR	107:29	61:0
chr9	97165128	r_478_1	A	[chr9:94802319[A	.	PASS	SVTYPE=BND;MATEID=r_478_0	TR:VR	107:29	61:0
chr10	63089801	r_70_0	T	[chrX:153090230[T	.	PASS	SVTYPE=BND;MATEID=r_70_1	TR:VR	105:12	58:0
chrX	153090230	r_70_1	T	[chr10:63089801[T	.	PASS	SVTYPE=BND;MATEID=r_70_0	TR:VR	105:12	58:0
chr19	55851389	i_675	C	<INS>	.	Too_low_VAF	END=55851389;SVTYPE=INS;SVINSLEN=781;SVINSSEQ=CGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATTCCCGAGGCTGCGGTGTAATTCCCGAGGCTGCGGTGTAATTCCCGAGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATTTAC	TR:VR	100:3	28:0
chr20	40997443	r_242_0	C	[chr20:41880473[G	.	PASS	SVTYPE=BND;MATEID=r_242_1	TR:VR	290:61	69:0
chr20	41880473	r_242_1	G	[chr20:40997443[G	.	PASS	SVTYPE=BND;MATEID=r_242_0	TR:VR	290:61	69:0
chr6	61260018	r_390_0	A	A[chrX:136084534[	.	PASS	SVTYPE=BND;MATEID=r_390_1	TR:VR	75:24	52:0
chrX	136084534	r_390_1	C	]chr6:61260018]C	.	PASS	SVTYPE=BND;MATEID=r_390_0	TR:VR	75:24	52:0
chr9	95047790	r_479_0	A	A[chrX:134291646[	.	PASS	SVTYPE=BND;MATEID=r_479_1	TR:VR	75:29	54:0
chrX	134291646	r_479_1	T	]chr9:95047790]T	.	PASS	SVTYPE=BND;MATEID=r_479_0	TR:VR	75:29	54:0
chr12	90453923	r_89_0	C	C]chrX:18298490]	.	PASS	SVTYPE=BND;MATEID=r_89_1	TR:VR	85:11	62:0
chrX	18298490	r_89_1	C	C]chr12:90453923]	.	PASS	SVTYPE=BND;MATEID=r_89_0	TR:VR	85:11	62:0
chr20	40997584	r_243	T	<DEL>	.	PASS	END=54879044;SVTYPE=DEL;SVLEN=-13881460	TR:VR	310:22	59:0
chr6	32378767	r_340	A	<DUP>	.	PASS	END=64831998;SVTYPE=DUP;SVLEN=32453231	TR:VR	91:17	63:0
chr8	86591284	r_457_0	A	]chrX:137790144]G	.	PASS	SVTYPE=BND;MATEID=r_457_1	TR:VR	181:10	63:0
chrX	137790144	r_457_1	G	G[chr8:86591284[	.	PASS	SVTYPE=BND;MATEID=r_457_0	TR:VR	181:10	63:0
chr9	95443187	r_480_0	G	]chrX:75239462]A	.	PASS	SVTYPE=BND;MATEID=r_480_1	TR:VR	55:8	48:0
chrX	75239462	r_480_1	A	A[chr9:95443187[	.	PASS	SVTYPE=BND;MATEID=r_480_0	TR:VR	55:8	48:0
chr10	63806128	r_71_0	T	T[chrX:136269829[	.	PASS	SVTYPE=BND;MATEID=r_71_1	TR:VR	145:48	68:0
chrX	136269829	r_71_1	G	]chr10:63806128]G	.	PASS	SVTYPE=BND;MATEID=r_71_0	TR:VR	145:48	68:0
chr12	93378419	r_90	G	<DEL>	.	Too_low_VAF	END=93394606;SVTYPE=DEL;SVLEN=-16187	TR:VR	75:3	37:0
chr17	22295301	r_144_0	G	G]chr19:46571108]	.	PASS	SVTYPE=BND;MATEID=r_144_1	TR:VR	77:36	54:0
chr19	46571108	r_144_1	C	C]chr17:22295301]	.	PASS	SVTYPE=BND;MATEID=r_144_0	TR:VR	77:36	54:0
chr20	40998181	r_244_0	G	G]chr20:45996634]	.	PASS	SVTYPE=BND;MATEID=r_244_1	TR:VR	244:70	52:0
chr20	45996634	r_244_1	A	A]chr20:40998181]	.	PASS	SVTYPE=BND;MATEID=r_244_0	TR:VR	244:70	52:0
chr22_KI270736v1_random	153988	r_270_0	G	[chrY:56837852[CACAAAGCACCCTGTGGTCAGATCCTAGAGAATAGTTATAGTGAGGCAGGTGGAGTGGAAAGGAATGGAGTGGATTGGTATAAAATGGAGTCGATTGGAGCAGAGTGGACTGGAAGGGAATACGGTGGAATGA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_270_1;SVINSLEN=132;SVINSSEQ=CACAAAGCACCCTGTGGTCAGATCCTAGAGAATAGTTATAGTGAGGCAGGTGGAGTGGAAAGGAATGGAGTGGATTGGTATAAAATGGAGTCGATTGGAGCAGAGTGGACTGGAAGGGAATACGGTGGAATG	TR:VR	975:3	815:0
chrY	56837852	r_270_1	A	[chr22_KI270736v1_random:153988[CATTCCACCGTATTCCCTTCCAGTCCACTCTGCTCCAATCGACTCCATTTTATACCAATCCACTCCATTCCTTTCCACTCCACCTGCCTCACTATAACTATTCTCTAGGATCTGACCACAGGGTGCTTTGTGA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_270_0;SVINSLEN=132;SVINSSEQ=CATTCCACCGTATTCCCTTCCAGTCCACTCTGCTCCAATCGACTCCATTTTATACCAATCCACTCCATTCCTTTCCACTCCACCTGCCTCACTATAACTATTCTCTAGGATCTGACCACAGGGTGCTTTGTG	TR:VR	975:3	815:0
chr5	119254819	r_311	G	<DEL>	.	PASS	END=119328000;SVTYPE=DEL;SVLEN=-73181	TR:VR	76:10	51:0
chr5	56325315	r_306_0	A	[chr5:150132329[A	.	PASS	SVTYPE=BND;MATEID=r_306_1	TR:VR	80:7	73:0
chr5	150132329	r_306_1	A	[chr5:56325315[A	.	PASS	SVTYPE=BND;MATEID=r_306_0	TR:VR	80:7	73:0
chr6	32656838	r_341_0	A	[chrX:85037166[TA	.	PASS	SVTYPE=BND;MATEID=r_341_1;SVINSLEN=1;SVINSSEQ=T	TR:VR	94:21	60:0
chrX	85037166	r_341_1	A	[chr6:32656838[AA	.	PASS	SVTYPE=BND;MATEID=r_341_0;SVINSLEN=1;SVINSSEQ=A	TR:VR	94:21	60:0
chr9	96406741	r_481_0	C	C]chrX:70402666]	.	PASS	SVTYPE=BND;MATEID=r_481_1	TR:VR	59:17	57:0
chrX	70402666	r_481_1	A	A]chr9:96406741]	.	PASS	SVTYPE=BND;MATEID=r_481_0	TR:VR	59:17	57:0
chrX	143152118	r_548	G	<DEL>	.	PASS	END=146078434;SVTYPE=DEL;SVLEN=-2926316	TR:VR	65:25	58:0
chrX	83865010	r_518	T	<DEL>	.	PASS	END=85149252;SVTYPE=DEL;SVLEN=-1284242	TR:VR	98:18	52:0
chr10	71171368	d_468	G	<DEL>	.	PASS	END=71171422;SVTYPE=DEL;SVLEN=-54	TR:VR	42:3	28:0
chr17	22703580	r_145_0	C	]chr19:58607614]G	.	PASS	SVTYPE=BND;MATEID=r_145_1	TR:VR	71:47	58:0
chr19	58607614	r_145_1	G	G[chr17:22703580[	.	PASS	SVTYPE=BND;MATEID=r_145_0	TR:VR	71:47	58:0
chr19	56103968	d_1135	T	<DEL>	.	PASS	END=56104023;SVTYPE=DEL;SVLEN=-55;SVINSLEN=53;SVINSSEQ=CCCTACGCACGACACCGCCGACCCGTGCCACGCACCGGGGAGGGTCCCTACGC	TR:VR	96:6	20:0
chr20	41879298	r_245	T	<DUP>	.	PASS	END=54871861;SVTYPE=DUP;SVLEN=12992563	TR:VR	224:58	55:0
chr4	49298450	r_287_0	G	GAGAGTCCCTGAGGGCTGGGGGTGAAGACATGAGAGAGAAAGGGGAGTAACTGAGTGAAACTGGTGAGTTTGGTGGTGACCCCGGGGTGCCTGGAACGGACTCCAGCTCCACCTAACTGGCTCCGAAAC]chrUn_GL000220v1:155679]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_287_1;SVINSLEN=128;SVINSSEQ=AGAGTCCCTGAGGGCTGGGGGTGAAGACATGAGAGAGAAAGGGGAGTAACTGAGTGAAACTGGTGAGTTTGGTGGTGACCCCGGGGTGCCTGGAACGGACTCCAGCTCCACCTAACTGGCTCCGAAAC	TR:VR	910:3	912:0
chrUn_GL000220v1	155679	r_287_1	G	GGTTTCGGAGCCAGTTAGGTGGAGCTGGAGTCCGTTCCAGGCACCCCGGGGTCACCACCAAACTCACCAGTTTCACTCAGTTACTCCCCTTTCTCTCTCATGTCTTCACCCCCAGCCCTCAGGGACTCT]chr4:49298450]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_287_0;SVINSLEN=128;SVINSSEQ=GTTTCGGAGCCAGTTAGGTGGAGCTGGAGTCCGTTCCAGGCACCCCGGGGTCACCACCAAACTCACCAGTTTCACTCAGTTACTCCCCTTTCTCTCTCATGTCTTCACCCCCAGCCCTCAGGGACTCT	TR:VR	910:3	912:0
chr5	119697738	r_312	T	<DEL>	.	PASS	END=119737440;SVTYPE=DEL;SVLEN=-39702	TR:VR	59:20	49:0
chr5	56367950	r_307_0	C	C]chr5:114641287]	.	PASS	SVTYPE=BND;MATEID=r_307_1	TR:VR	83:10	52:0
chr5	114641287	r_307_1	A	A]chr5:56367950]	.	PASS	SVTYPE=BND;MATEID=r_307_0	TR:VR	83:10	52:0
chr6	33791502	r_342	C	<DEL>	.	PASS	END=35420866;SVTYPE=DEL;SVLEN=-1629364	TR:VR	92:15	39:0
chr6	61462342	r_391_0	T	]chrX:116164986]A	.	PASS	SVTYPE=BND;MATEID=r_391_1	TR:VR	80:11	52:0
chrX	116164986	r_391_1	A	A[chr6:61462342[	.	PASS	SVTYPE=BND;MATEID=r_391_0	TR:VR	80:11	52:0
chr8	88309263	r_458	A	<DUP>	.	Too_low_VAF	END=88546949;SVTYPE=DUP;SVLEN=237686	TR:VR	209:4	73:0
chr9	97158850	r_482_0	C	]chrX:133811948]A	.	PASS	SVTYPE=BND;MATEID=r_482_1	TR:VR	69:31	56:0
chrX	133811948	r_482_1	A	A[chr9:97158850[	.	PASS	SVTYPE=BND;MATEID=r_482_0	TR:VR	69:31	56:0
chrX	85036955	r_519_0	C	C]chrX:85037154]	.	PASS	SVTYPE=BND;MATEID=r_519_1	TR:VR	56:24	30:0
chrX	85037154	r_519_1	A	A]chrX:85036955]	.	PASS	SVTYPE=BND;MATEID=r_519_0	TR:VR	56:24	30:0
chr20	29941000	i_877	A	<INS>	.	PASS	END=29941000;SVTYPE=INS;SVINSLEN=341;SVINSSEQ=GAAACGTCTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCACTTGGATATTTGGAGCGCTTTGATGCCTATGGTGGAAAAGGAAATATCCGCCCATAAAAACTAGACAGCAGCATTCTCAGAAACTTGTTTGTGTTGTGGGCATTCAACTCACAGAGTTGAGCTTTCCTTTGATTGAGCAGTTTTGAAAATGTCTTTTTGCAGAATCTGCAAGTGGATATTTGGAGCGGTTTGAGGCCTATGGTGTAAAAGGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTCTG	TR:VR	30:4	15:0
chr20	41880451	r_246	T	<DEL>	.	PASS	END=41891396;SVTYPE=DEL;SVLEN=-10945	TR:VR	217:57	45:0
chr6	34792575	r_343_0	C	CT]chrX:75547056]	.	PASS	SVTYPE=BND;MATEID=r_343_1;SVINSLEN=1;SVINSSEQ=T	TR:VR	75:24	53:0
chrX	75547056	r_343_1	G	GA]chr6:34792575]	.	PASS	SVTYPE=BND;MATEID=r_343_0;SVINSLEN=1;SVINSSEQ=A	TR:VR	75:24	53:0
chr6	61480265	r_392_0	T	TATTCATTCAGCAGTTTGCAAACACTGTTTTTGTGGAATCTGCGAAGGGATATTTGGGATCGCATTGAGGCCTATGGTGCAAAAGAAAATATCTTCACATAAAAACTAGAAAGAAGCTTTCTGAGAAACTGCT]chrX:80705656]	.	PASS	SVTYPE=BND;MATEID=r_392_1;SVINSLEN=132;SVINSSEQ=ATTCATTCAGCAGTTTGCAAACACTGTTTTTGTGGAATCTGCGAAGGGATATTTGGGATCGCATTGAGGCCTATGGTGCAAAAGAAAATATCTTCACATAAAAACTAGAAAGAAGCTTTCTGAGAAACTGCT	TR:VR	74:15	50:0
chrX	80705656	r_392_1	A	AAGCAGTTTCTCAGAAAGCTTCTTTCTAGTTTTTATGTGAAGATATTTTCTTTTGCACCATAGGCCTCAATGCGATCCCAAATATCCCTTCGCAGATTCCACAAAAACAGTGTTTGCAAACTGCTGAATGAAT]chr6:61480265]	.	PASS	SVTYPE=BND;MATEID=r_392_0;SVINSLEN=132;SVINSSEQ=AGCAGTTTCTCAGAAAGCTTCTTTCTAGTTTTTATGTGAAGATATTTTCTTTTGCACCATAGGCCTCAATGCGATCCCAAATATCCCTTCGCAGATTCCACAAAAACAGTGTTTGCAAACTGCTGAATGAAT	TR:VR	74:15	50:0
chr8	144625475	d_1959	C	<INS>	.	Too_low_VAF	END=144625453;SVTYPE=INS;SVINSLEN=131;SVINSSEQ=GGCGGCCCGGTTCACGGAGCACTCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACCCACTGC	TR:VR	83:3	25:0
chr8	94197304	d_1919	A	<DEL>	.	PASS	END=94197687;SVTYPE=DEL;SVLEN=-383	TR:VR	101:41	24:0
chr9	97165075	r_483_0	C	C[chrX:147416484[	.	PASS	SVTYPE=BND;MATEID=r_483_1	TR:VR	123:33	58:0
chrX	147416484	r_483_1	G	]chr9:97165075]G	.	PASS	SVTYPE=BND;MATEID=r_483_0	TR:VR	123:33	58:0
chrX	85148016	r_520	A	<DUP>	.	PASS	END=115657216;SVTYPE=DUP;SVLEN=30509200	TR:VR	93:14	47:0
chr1	214492503	r_35	G	<DUP>	.	PASS	END=215970765;SVTYPE=DUP;SVLEN=1478262;SVINSLEN=2;SVINSSEQ=TT	TR:VR	125:21	60:0
chr17	22754960	r_147	G	<DUP>	.	Too_low_VAF	END=61837497;SVTYPE=DUP;SVLEN=39082537	TR:VR	173:3	37:0
chr2	134650755	r_226	C	<DUP>	.	PASS	END=134980193;SVTYPE=DUP;SVLEN=329438	TR:VR	83:18	40:0
chr20	41891388	r_247	T	<DEL>	.	PASS	END=47555126;SVTYPE=DEL;SVLEN=-5663738	TR:VR	351:60	52:0
chr20	61948043	d_1411	C	<DEL>	.	Too_low_VAF	END=61948483;SVTYPE=DEL;SVLEN=-440;SVINSLEN=40;SVINSSEQ=TTCTCATCAACGATGAGGAGCATCGCGGCTGTCTGCACCA	TR:VR	88:4	24:0
chr3	195746512	r_282	T	<DEL>	.	PASS	END=195749161;SVTYPE=DEL;SVLEN=-2649;SVINSLEN=29;SVINSSEQ=TAATTATAATTATTAAATAATTAAATAAT	TR:VR	79:6	47:1
chr6	34901001	r_344_0	C	[chrX:134758744[CA	.	PASS	SVTYPE=BND;MATEID=r_344_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	74:9	54:0
chrX	134758744	r_344_1	A	[chr6:34901001[GA	.	PASS	SVTYPE=BND;MATEID=r_344_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	74:9	54:0
chr6	61703009	r_393_0	C	]chrX:117914500]A	.	PASS	SVTYPE=BND;MATEID=r_393_1	TR:VR	61:15	57:0
chrX	117914500	r_393_1	A	A[chr6:61703009[	.	PASS	SVTYPE=BND;MATEID=r_393_0	TR:VR	61:15	57:0
chr8	136710090	r_469	A	<DEL>	.	PASS	END=140303695;SVTYPE=DEL;SVLEN=-3593605	TR:VR	143:8	55:0
chr9	97277526	r_484_0	C	C]chrX:73050557]	.	PASS	SVTYPE=BND;MATEID=r_484_1	TR:VR	55:16	60:0
chrX	73050557	r_484_1	T	T]chr9:97277526]	.	PASS	SVTYPE=BND;MATEID=r_484_0	TR:VR	55:16	60:0
chrX	85148369	r_521	G	<DEL>	.	PASS	END=116155617;SVTYPE=DEL;SVLEN=-31007248	TR:VR	91:13	52:0
chr12	98005813	r_91	A	<DUP>	.	PASS	END=98613289;SVTYPE=DUP;SVLEN=607476	TR:VR	122:16	48:0
chr17	23014936	r_148_0	C	]chr21:18272532]TTCGAGAGAGAAGCTTTGAAACACTCTTTTTCCAGAATGTGCAAGTGGACATTTGGGGAGCTTTGAGGCCTGTGGAGGAAAAGGGAATTATCTTCCCGTAAAAGCTAGATAGAAGCATTCTCAGAAACTAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_148_1;SVINSLEN=130;SVINSSEQ=TTCGAGAGAGAAGCTTTGAAACACTCTTTTTCCAGAATGTGCAAGTGGACATTTGGGGAGCTTTGAGGCCTGTGGAGGAAAAGGGAATTATCTTCCCGTAAAAGCTAGATAGAAGCATTCTCAGAAACTA	TR:VR	498:4	294:0
chr21	18272532	r_148_1	T	TTAGTTTCTGAGAATGCTTCTATCTAGCTTTTACGGGAAGATAATTCCCTTTTCCTCCACAGGCCTCAAAGCTCCCCAAATGTCCACTTGCACATTCTGGAAAAAGAGTGTTTCAAAGCTTCTCTCTCGAA[chr17:23014936[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_148_0;SVINSLEN=130;SVINSSEQ=TAGTTTCTGAGAATGCTTCTATCTAGCTTTTACGGGAAGATAATTCCCTTTTCCTCCACAGGCCTCAAAGCTCCCCAAATGTCCACTTGCACATTCTGGAAAAAGAGTGTTTCAAAGCTTCTCTCTCGAA	TR:VR	498:4	294:0
chr19	56235649	d_1138	T	<INS>	.	Too_small_size;Too_low_VAF	END=56235604;SVTYPE=INS;SVINSLEN=60;SVINSSEQ=CTGATGGACGGTGGGCCAAGCCTCCACTCCAGCCTCTGATGGACGGTGGGCCAAGCCTCC	TR:VR	77:3	28:0
chr3	90531890	i_1099	T	<INS>	.	Too_low_VAF	END=90531890;SVTYPE=INS;SVINSLEN=175;SVINSSEQ=ATTCACTTGCAGATCCTACAAAAAGAGTATTTCAAAACTATTCTATCAAAATAAATTTTAAAGTCGGTGGGTTGAACGCACACATCACAAAGCAGTTCATGAGAATCATTCTGTCTAGTTTTTCTATGAAGATATTGCCTTTTCTACACTAGGCCTCAAATGGTGCTGAATGTCC	TR:VR	159:3	82:1
chr6	35352867	r_345	G	<DEL>	.	PASS	END=64524162;SVTYPE=DEL;SVLEN=-29171295	TR:VR	98:10	54:0
chr6	61708864	r_394	A	<DEL>	.	PASS	END=64737039;SVTYPE=DEL;SVLEN=-3028175	TR:VR	91:16	57:0
chr8	136712086	r_470	A	<DUP>	.	Too_low_VAF	END=140297247;SVTYPE=DUP;SVLEN=3585161	TR:VR	147:6	54:0
chr9	97325369	r_485_0	T	[chrX:68438819[C	.	PASS	SVTYPE=BND;MATEID=r_485_1	TR:VR	71:24	48:0
chrX	68438819	r_485_1	C	[chr9:97325369[C	.	PASS	SVTYPE=BND;MATEID=r_485_0	TR:VR	71:24	48:0
chrX	148571516	r_549	G	<DEL>	.	PASS	END=148590525;SVTYPE=DEL;SVLEN=-19009	TR:VR	72:19	57:0
chrX	85850108	r_522_0	T	T]chrX:126288300]	.	PASS	SVTYPE=BND;MATEID=r_522_1	TR:VR	49:16	46:0
chrX	126288300	r_522_1	G	G]chrX:85850108]	.	PASS	SVTYPE=BND;MATEID=r_522_0	TR:VR	49:16	46:0
chr16	46383262	d_928	A	<DEL>	.	Too_low_VAF	END=46383373;SVTYPE=DEL;SVLEN=-111	TR:VR	920:3	868:1
chr2	43855050	r_207_0	T	T[chr8:139994278[	.	PASS	SVTYPE=BND;MATEID=r_207_1	TR:VR	118:7	59:0
chr8	139994278	r_207_1	G	]chr2:43855050]G	.	PASS	SVTYPE=BND;MATEID=r_207_0	TR:VR	118:7	59:0
chr5	34042617	r_301_0	C	[chr5:42695813[A	.	PASS	SVTYPE=BND;MATEID=r_301_1	TR:VR	149:12	60:0
chr5	42695813	r_301_1	A	[chr5:34042617[A	.	PASS	SVTYPE=BND;MATEID=r_301_0	TR:VR	149:12	60:0
chr5	57015819	r_308	A	<DEL>	.	PASS	END=119079147;SVTYPE=DEL;SVLEN=-62063328	TR:VR	60:8	39:0
chr6	35781232	r_346_0	T	T]chr6:57929939]	.	PASS	SVTYPE=BND;MATEID=r_346_1	TR:VR	107:21	59:0
chr6	57929939	r_346_1	A	A]chr6:35781232]	.	PASS	SVTYPE=BND;MATEID=r_346_0	TR:VR	107:21	59:0
chr6	61725334	r_395_0	G	]chrX:135972636]T	.	PASS	SVTYPE=BND;MATEID=r_395_1	TR:VR	74:25	55:0
chrX	135972636	r_395_1	T	T[chr6:61725334[	.	PASS	SVTYPE=BND;MATEID=r_395_0	TR:VR	74:25	55:0
chr9	97437606	r_486_0	T	T[chrX:116297049[	.	PASS	SVTYPE=BND;MATEID=r_486_1	TR:VR	55:19	63:0
chrX	116297049	r_486_1	T	]chr9:97437606]T	.	PASS	SVTYPE=BND;MATEID=r_486_0	TR:VR	55:19	63:0
chrX	88193775	r_523_0	C	[chrX:104653559[T	.	PASS	SVTYPE=BND;MATEID=r_523_1	TR:VR	61:21	61:0
chrX	104653559	r_523_1	T	[chrX:88193775[T	.	PASS	SVTYPE=BND;MATEID=r_523_0	TR:VR	61:21	61:0
chr16	53344416	r_138_0	A	]chrX:134301653]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_138_1	TR:VR	95:3	74:1
chrX	134301653	r_138_1	T	T[chr16:53344416[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_138_0	TR:VR	95:3	74:1
chr21	7945360	i_986	C	<INS>	.	Too_low_VAF	END=7945363;SVTYPE=INS;SVINSLEN=369;SVINSSEQ=CATTCATTCCTTTCGAGTCAGGATCTAACTCTCAATTCCAGGCTTCATTCCAGTGGCACAATCTCAGCTCACATTTCGTTTCACCATTCCATTTCATTCCATTGCATGTCATTTCCATTCCATTCCATTCCATTCCACTCCACTCCACTCCACTCCACTCTGTTCCATTCCAGATTCCTTCTCCATTCCATTCCACTCCAATCCACTTCTGAATCCACTCCACTCCATTCTTTTCCATTCCACTCAACTCCACTCCATTTCACTGCATTCCATTTGACAGTGTCCACTCTGTTCCAGAAGCCTGGATTCCAGTGGCACATTCCATTCAGCTCACATTACATTCAACGTTCCATTCCAATCCATTCCACT	TR:VR	462:3	268:0
chr6	61743285	r_396	G	<DUP>	.	PASS	END=168774862;SVTYPE=DUP;SVLEN=107031577	TR:VR	65:6	61:0
