Type: Package
Package: msigdbr
Title: MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format
Version: 7.5.1
Authors@R: person("Igor", "Dolgalev", , "igor.dolgalev@nyumc.org", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-4451-126X"))
Description: Provides the 'Molecular Signatures Database' (MSigDB) gene sets typically used with the 'Gene Set Enrichment Analysis' (GSEA) software (Subramanian et al. 2005 <doi:10.1073/pnas.0506580102>, Liberzon et al. 2015 <doi:10.1016/j.cels.2015.12.004>) in a standard R data frame with key-value pairs. The package includes the human genes as listed in MSigDB as well as the corresponding symbols and IDs for frequently studied model organisms such as mouse, rat, pig, fly, and yeast.
License: MIT + file LICENSE
URL: https://igordot.github.io/msigdbr/
BugReports: https://github.com/igordot/msigdbr/issues
Depends: R (>= 3.4)
Imports: babelgene, dplyr (>= 0.7.0), magrittr, rlang, tibble, tidyselect
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
Encoding: UTF-8
RoxygenNote: 7.1.2
NeedsCompilation: no
Packaged: 2022-03-30 00:48:07 UTC; id460
Author: Igor Dolgalev [aut, cre] (<https://orcid.org/0000-0003-4451-126X>)
Maintainer: Igor Dolgalev <igor.dolgalev@nyumc.org>
Repository: CRAN
Date/Publication: 2022-03-30 07:00:16 UTC
Built: R 4.1.3; ; 2024-11-08 18:36:30 UTC; unix
RemoteType: standard
RemotePkgRef: msigdbr
RemoteRef: msigdbr
RemoteRepos: https://cloud.r-project.org
RemoteReposName: CRAN
RemotePkgPlatform: source
RemoteSha: 7.5.1