AtomicList              Lists of Atomic Vectors in Natural and Rle Form
AtomicList-utils        Common operations on AtomicList objects
CompressedHitsList-class
                        CompressedHitsList objects
CompressedList-class    CompressedList objects
DataFrameList-class     List of DataFrames
Grouping-class          Grouping objects
Hits-examples           Examples of basic manipulation of Hits objects
IPos-class              IPos objects
IPosRanges-class        IPosRanges objects
IPosRanges-comparison   Comparing and ordering ranges
IRanges-class           IRanges and NormalIRanges objects
IRanges-constructor     The IRanges constructor and supporting
                        functions
IRanges-utils           IRanges utility functions
IRangesList-class       List of IRanges and NormalIRanges
IntegerRanges-class     IntegerRanges objects
IntegerRangesList-class
                        IntegerRangesList objects
MaskCollection-class    MaskCollection objects
NCList-class            Nested Containment List objects
RangedSelection-class   Selection of ranges and columns
RleViews-class          The RleViews class
RleViewsList-class      List of RleViews
Views-class             Views objects
ViewsList-class         List of Views
coverage-methods        Coverage of a set of ranges
extractList             Group elements of a vector-like object into a
                        list-like object
extractListFragments    Extract list fragments from a list-like object
findOverlaps-methods    Finding overlapping ranges
inter-range-methods     Inter range transformations of an
                        IntegerRanges, Views, IntegerRangesList, or
                        MaskCollection object
intra-range-methods     Intra range transformations of an IRanges,
                        IPos, Views, RangesList, or MaskCollection
                        object
multisplit              Split elements belonging to multiple groups
nearest-methods         Finding the nearest range/position neighbor
range-squeezers         Squeeze the ranges out of a range-based object
ranges,Rle-method       Rle objects (old man page)
read.Mask               Read a mask from a file
reverse                 reverse
setops-methods          Set operations on IntegerRanges and
                        IntegerRangesList objects
slice-methods           Slice a vector-like or list-like object
unsplit,List-method     2 methods that should be documented somewhere
                        else
view-summarization-methods
                        Summarize views on a vector-like object with
                        numeric values
window<-,Vector-method
                        Vector objects (old man page)