Package: BiocIO Title: Standard Input and Output for Bioconductor Packages Version: 1.4.0 Authors@R: c( person("Martin", "Morgan", role = "aut"), person("Michael", "Lawrence", role = "aut"), person("Daniel", "Van Twisk", role = "aut"), person( family = "Bioconductor Package Maintainer", role = "cre", email = "maintainer@bioconductor.org" )) Description: Implements `import()` and `export()` standard generics for importing and exporting biological data formats. `import()` supports whole-file as well as chunk-wise iterative import. The `import()` interface optionally provides a standard mechanism for 'lazy' access via `filter()` (on row or element-like components of the file resource), `select()` (on column-like components of the file resource) and `collect()`. The `import()` interface optionally provides transparent access to remote (e.g. via https) as well as local access. Developers can register a file extension, e.g., `.loom` for dispatch from character-based URIs to specific `import()` / `export()` methods based on classes representing file types, e.g., `LoomFile()`. License: Artistic-2.0 Encoding: UTF-8 Roxygen: list(markdown = TRUE) RoxygenNote: 7.1.1 Depends: R (>= 4.0) Imports: BiocGenerics, S4Vectors, methods, tools Suggests: testthat, knitr, rmarkdown, BiocStyle Collate: export.R import.R BiocFile.R compression.R VignetteBuilder: knitr biocViews: Annotation,DataImport BugReports: https://github.com/Bioconductor/BiocIO/issues git_url: https://git.bioconductor.org/packages/BiocIO git_branch: RELEASE_3_14 git_last_commit: c335932 git_last_commit_date: 2021-10-26 Date/Publication: 2021-10-26 NeedsCompilation: no Packaged: 2021-10-26 20:54:28 UTC; biocbuild Author: Martin Morgan [aut], Michael Lawrence [aut], Daniel Van Twisk [aut], Bioconductor Package Maintainer [cre] Maintainer: Bioconductor Package Maintainer Built: R 4.1.3; ; 2023-08-23 17:26:01 UTC; unix