Info:    Log File: /projects/remc_bigdata/MORGEN/MM0596/MM0596-1L_61Y4RAAXX_6.log
Info:     * Output directory     : /projects/remc_bigdata/MORGEN/MM0596/
Info:     * Naming files as      : MM0596-1L_61Y4RAAXX_6
Info:     * MC simulation        : Off
Info:     * Chr name prepend     : none
Info:     * Min. reported pk ht  : 0
Info:     * Min. cov. allowed    : 0.0010
Info:     * Minimum ht to process: Off
Info:     * Lander-Waterman FDR  : Off
Info:     * Output Sequence      : Off
Info:     * Control files in use : Off
Info:     * Compare files in use : Off
Info:     * Auto-threshold       : Off
Info:     * Filter on PET flags  : Off
Info:     * Maximum PET frag size: Off
Info:     * Aligner              : sam
Info:     * Triangle dist.       : 100 low
Info:     * Triangle dist.       : 200 median
Info:     * Triangle dist.       : 300 high
Info:     * One file per chr.    : Off
Info:     * Sub-peaks            : Off
Info:     * Trim                 : Off
Info:     * Saturation Analysis  : Off
Info:     * Wig step size        : 1
Info:     * Histogram length     : 30
Info:     * Histogram precision  : 1
Info:     * Peaks File Header    : On
Info:     * Min readahead window : Off
Info:     * Bedgraph/Wigfile     : wig file
Info:     * R mode               : Off
Info:     * Filter Duplicates    : Off
Info:     * Filter quality       : Off
Info:     * Input Files          : 
Info:          /projects/analysis/analysis5/MM0596/61Y4RAAXX_6/bwa/61Y4RAAXX_6.bam
Version: Initializing class PeakWriter                        $Revision: 1498 $
Version: Initializing class Generic_AlignRead_Iterator        $Revision: 1600 $
Version: Initializing class SAMIterator                       $Revision: 936 $
Info:    Running Peak Processor
Version: Initializing class PeakDataSet Peak Locator          $Revision: 2226 $
Version: Initializing class PeakStore                         $Revision: 1335 $
Version: Initializing class MapStore                          $Revision: 1335 $
Info:    Current chromosome : 1
Info:    Reads used: 1041280
Info:    Reads filtered by iterator: 2068
Version: Initializing class PeakStats                         $Revision: 1335 $
Version: Initializing class Histogram                         $Revision: 1197 $
Version: Initializing class WigwriterBuffered                 $Revision: 2195 $
Info:    writing to : /projects/remc_bigdata/MORGEN/MM0596/MM0596-1L_61Y4RAAXX_6_triangle_standard_1.wig.gz
Info:    Running Peak Processor
Info:    Current chromosome : 10
Info:    Reads used: 746784
Info:    Reads filtered by iterator: 3460
Info:    Running Peak Processor
Info:    Current chromosome : 11
Info:    Reads used: 851324
Info:    Reads filtered by iterator: 5300
Info:    Running Peak Processor
Info:    Current chromosome : 12
Info:    Reads used: 658008
Info:    Reads filtered by iterator: 6994
Info:    Running Peak Processor
Info:    Current chromosome : 13
Info:    Reads used: 682192
Info:    Reads filtered by iterator: 8536
Info:    Running Peak Processor
Info:    Current chromosome : 14
Info:    Reads used: 658663
Info:    Reads filtered by iterator: 9591
Info:    Running Peak Processor
Info:    Current chromosome : 15
Info:    Reads used: 564465
Info:    Reads filtered by iterator: 10649
Info:    Running Peak Processor
Info:    Current chromosome : 16
Info:    Reads used: 529736
Info:    Reads filtered by iterator: 11629
Info:    Running Peak Processor
Info:    Current chromosome : 17
Info:    Reads used: 588320
Info:    Reads filtered by iterator: 12809