Version: Vancouver Short Read Analysis Package 4.0.16-dev.interval Version: Initializing class SeparateReads $Revision: 3125 $ Version: Initializing class Generic_AlignRead_Iterator $Revision: 3118 $ Version: Initializing class BedIterator $Revision: 2933 $ Version: Initializing class Log_Buffer $Revision: 2530 $ Info: 1000000 lines processed. Info: Found 1310667 records. Version: Initializing class FileOut $Revision: 2530 $ Info: chr4.part.interval.gz 72304 Info: chr3.part.interval.gz 74158 Info: chr2.part.interval.gz 122597 Info: chrY.part.interval.gz 819 Info: chr1.part.interval.gz 109570 Info: chrX.part.interval.gz 46017 Info: chrM.part.interval.gz 102 Info: chr19.part.interval.gz 29491 Info: chr18.part.interval.gz 43477 Info: chr17.part.interval.gz 42500 Info: chr16.part.interval.gz 45673 Info: chr15.part.interval.gz 48987 Info: chr14.part.interval.gz 52091 Info: chr13.part.interval.gz 56772 Info: chr12.part.interval.gz 57973 Info: chr11.part.interval.gz 65664 Info: chr9.part.interval.gz 121176 Info: chr10.part.interval.gz 63326 Info: chr8.part.interval.gz 57247 Info: chr7.part.interval.gz 63641 Info: chr6.part.interval.gz 71898 Info: chr5.part.interval.gz 65184