Version: Vancouver Short Read Analysis Package 4.0.16-dev.interval Version: Initializing class SeparateReads $Revision: 3125 $ Version: Initializing class Generic_AlignRead_Iterator $Revision: 3118 $ Version: Initializing class BedIterator $Revision: 2933 $ Version: Initializing class Log_Buffer $Revision: 2530 $ Info: 1000000 lines processed. Info: 2000000 lines processed. Info: 3000000 lines processed. Info: 4000000 lines processed. Info: 5000000 lines processed. Info: 6000000 lines processed. Info: 7000000 lines processed. Info: Found 7942090 records. Version: Initializing class FileOut $Revision: 2530 $ Info: chr15.part.interval.gz 343038 Info: chr14.part.interval.gz 316962 Info: chr13.part.interval.gz 333535 Info: chr17_random.part.interval.gz 1035 Info: chr12.part.interval.gz 326192 Info: chr11.part.interval.gz 565982 Info: chrY_random.part.interval.gz 16715 Info: chr10.part.interval.gz 401477 Info: chr4_random.part.interval.gz 153 Info: chrUn_random.part.interval.gz 8254 Info: chrY.part.interval.gz 1299 Info: chrX.part.interval.gz 118874 Info: chr16_random.part.interval.gz 1 Info: chrX_random.part.interval.gz 529 Info: chr3_random.part.interval.gz 56 Info: chrM.part.interval.gz 235 Info: chr1_random.part.interval.gz 2938 Info: chr9_random.part.interval.gz 1128 Info: chr13_random.part.interval.gz 1268 Info: chr7_random.part.interval.gz 64 Info: chr9.part.interval.gz 459498 Info: chr8.part.interval.gz 446523 Info: chr8_random.part.interval.gz 1576 Info: chr7.part.interval.gz 462864 Info: chr6.part.interval.gz 457091 Info: chr5.part.interval.gz 506835 Info: chr4.part.interval.gz 541755 Info: chr3.part.interval.gz 368550 Info: chr2.part.interval.gz 617665 Info: chr1.part.interval.gz 499381 Info: chr5_random.part.interval.gz 76 Info: chr19.part.interval.gz 265947 Info: chr18.part.interval.gz 250790 Info: chr17.part.interval.gz 346812 Info: chr16.part.interval.gz 276992