Version: Vancouver Short Read Analysis Package 4.0.16-dev.interval Version: Initializing class SeparateReads $Revision: 3125 $ Version: Initializing class Generic_AlignRead_Iterator $Revision: 3118 $ Version: Initializing class BedIterator $Revision: 2933 $ Version: Initializing class Log_Buffer $Revision: 2530 $ Info: 1000000 lines processed. Info: 2000000 lines processed. Info: 3000000 lines processed. Info: 4000000 lines processed. Info: 5000000 lines processed. Info: 6000000 lines processed. Info: 7000000 lines processed. Info: 8000000 lines processed. Info: 9000000 lines processed. Info: 10000000 lines processed. Info: 11000000 lines processed. Info: 12000000 lines processed. Info: 13000000 lines processed. Info: Found 13260571 records. Version: Initializing class FileOut $Revision: 2530 $ Info: chr4.part.interval.gz 774353 Info: chr3.part.interval.gz 681077 Info: chr2.part.interval.gz 1165466 Info: chrY.part.interval.gz 7859 Info: chr1.part.interval.gz 914472 Info: chrX.part.interval.gz 299217 Info: chrM.part.interval.gz 87 Info: chr19.part.interval.gz 403133 Info: chr18.part.interval.gz 387728 Info: chr17.part.interval.gz 538654 Info: chr16.part.interval.gz 477305 Info: chr15.part.interval.gz 553656 Info: chr14.part.interval.gz 531733 Info: chr13.part.interval.gz 604279 Info: chr12.part.interval.gz 540696 Info: chr11.part.interval.gz 890116 Info: chr9.part.interval.gz 900435 Info: chr10.part.interval.gz 712024 Info: chr8.part.interval.gz 628590 Info: chr7.part.interval.gz 752503 Info: chr6.part.interval.gz 723960 Info: chr5.part.interval.gz 773228