STATISTIC   CEMT_7 CEMT_8 CEMT_9 CEMT_1 CEMT_4 CEMT_5 CEMT_6 WT312 WT313 WT340 WT341 WT354 WT355
ensembl_tss_Plus_One.gains 13681.000 681.000 3127.000 508.000 586.000 3676.000 760.000 665.000 3730.000 778.000 640.000 684.000 684.000
ensembl_tssStart_to_tssStop.gains 2920.000 310.000 863.000 250.000 289.000 840.000 408.000 344.000 856.000 357.000 318.000 324.000 317.000
refseq_tss_Plus_One.gains 2417.000 108.000 669.000 83.000 96.000 536.000 100.000 105.000 531.000 111.000 108.000 117.000 111.000
refseq_tssStart_to_tssStop.gains 1751.000 119.000 498.000 100.000 114.000 426.000 109.000 124.000 409.000 121.000 119.000 128.000 132.000
ensembl_tss_Plus_One.losses 1129.000 1073.000 1039.000 6553.000 6482.000 2313.000 6964.000 923.000 22391.000 943.000 12233.000 6279.000 7051.000
ensembl_tssStart_to_tssStop.losses 598.000 586.000 554.000 2449.000 2443.000 1113.000 2545.000 524.000 4261.000 528.000 2741.000 2247.000 2403.000
refseq_tss_Plus_One.losses 262.000 251.000 235.000 1505.000 1492.000 458.000 1606.000 224.000 3851.000 222.000 2202.000 1488.000 1598.000
refseq_tssStart_to_tssStop.losses 235.000 216.000 203.000 1097.000 1088.000 379.000 1167.000 207.000 2712.000 213.000 1557.000 1086.000 1185.000
mean(sizes) 770620.971 770620.971 382475.872 649207.575 601472.595 522934.049 672046.689 258214.195 1165934.651 300411.995 769244.273 646403.132 608176.687
sd(sizes) 3672754.436 3672754.436 2500076.532 5826835.890 4494791.372 2882359.958 5339835.943 2196444.964 5569058.848 2358940.633 5858445.723 4617693.445 4375309.886
mean(sizes|gain) 971667.608 971667.608 317564.603 186450.927 181049.842 523138.704 207593.202 190705.399 391118.154 272186.143 250681.236 274399.813 259924.393
sd(sizes|gain 3965445.645 3965445.645 1780512.474 1461164.514 1437096.529 2499813.312 1469420.361 1447820.680 1821774.445 1884798.539 1812655.394 1992652.037 1856462.043
mean(sizes|loss) 476192.016 476192.016 474620.029 1178072.315 1105561.567 522692.636 1226249.643 341463.383 2040480.005 335875.246 1472426.613 1070775.850 955024.738
sd(sizes|loss) 3183835.501 3183835.501 3263714.832 8365277.639 6449905.622 3283149.426 7717320.877 2864347.370 7810068.041 2849866.861 8705260.608 6394893.563 5883205.319
Comparison type Library Type CEMT_7 CEMT_8 CEMT_9 CEMT_1 CEMT_4 CEMT_5 CEMT_6 WT312 WT313 WT340 WT341 WT354 WT355
All (Gains, Losses, Normal) WGS 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
All (Gains, Losses, Normal) H3K9me3 0.829 0.839 0.832 0.264 0.629 0.498 0.839 0.860 0.826 0.646 0.554 0.617 0.796
All (Gains, Losses, Normal) H3K27me3 0.786 0.667 0.653 0.163 0.087 0.453 0.747 0.738 0.773 0.320 0.197 0.222 0.219
All (Gains, Losses, Normal) H3K4me1 0.498 0.209 0.211 0.310 0.053 0.251 0.657 0.639 0.524 0.141 0.132 0.180 0.111
All (Gains, Losses, Normal) H3K36me3 0.480 0.199 0.186 0.145 0.022 0.065 0.462 0.331 0.374 0.044 0.042 0.091 0.143
All (Gains, Losses, Normal) H3K27ac 0.433 0.154 0.118 0.261 0.021 0.092 0.472 0.523 0.181 0.039 0.075 0.101 0.082
All (Gains, Losses, Normal) H3K4me3 0.005 0.025 0.038 0.164 0.021 0.036 0.260 0.396 0.164 0.027 0.039 0.022 0.045
Copy Number Gains WGS 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
Copy Number Gains H3K9me3 0.893 0.887 0.867 0.608 0.770 0.734 0.874 0.900 0.821 0.818 0.802 0.863 0.890
Copy Number Gains H3K27me3 0.875 0.861 0.828 0.377 0.381 0.743 0.864 0.886 0.815 0.775 0.619 0.740 0.634
Copy Number Gains H3K36me3 0.721 0.749 0.481 0.314 0.108 0.237 0.848 0.874 0.698 0.515 0.416 0.648 0.773
Copy Number Gains H3K4me1 0.720 0.787 0.569 0.651 0.277 0.619 0.860 0.892 0.745 0.729 0.646 0.757 0.647
Copy Number Gains H3K27ac 0.702 0.772 0.397 0.489 0.117 0.288 0.855 0.885 0.424 0.453 0.614 0.628 0.563
Copy Number Gains H3K4me3 0.004 0.295 0.131 0.382 0.127 0.107 0.849 0.879 0.429 0.334 0.415 0.220 0.466
Copy Number Gains + Losses WGS 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
Copy Number Gains + Losses H3K9me3 0.883 0.868 0.851 0.599 0.731 0.707 0.863 0.886 0.771 0.757 0.767 0.844 0.890
Copy Number Gains + Losses H3K27me3 0.865 0.825 0.799 0.417 0.386 0.719 0.848 0.850 0.763 0.702 0.531 0.696 0.612
Copy Number Gains + Losses H3K36me3 0.716 0.731 0.479 0.371 0.109 0.250 0.819 0.818 0.606 0.477 0.180 0.511 0.655
Copy Number Gains + Losses H3K4me1 0.714 0.759 0.560 0.636 0.264 0.592 0.847 0.858 0.671 0.666 0.453 0.682 0.539
Copy Number Gains + Losses H3K27ac 0.696 0.751 0.397 0.502 0.088 0.280 0.826 0.862 0.361 0.433 0.303 0.503 0.422
Copy Number Gains + Losses H3K4me3 0.004 0.283 0.133 0.419 0.097 0.109 0.790 0.842 0.342 0.318 0.163 0.140 0.277
Copy Number Losses WGS 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
Copy Number Losses H3K9me3 0.591 0.457 0.551 0.461 0.569 0.545 0.506 0.570 0.469 0.655 0.317 0.461 0.157
Copy Number Losses H3K27me3 0.556 0.382 0.562 0.350 0.176 0.536 0.481 0.575 0.471 0.676 0.209 0.293 0.109
Copy Number Losses H3K4me1 0.560 0.319 0.567 0.455 0.136 0.453 0.452 0.574 0.302 0.676 0.131 0.260 0.124
Copy Number Losses H3K36me3 0.566 0.318 0.533 0.319 0.042 0.253 0.390 0.569 0.238 0.574 0.044 0.114 0.103
Copy Number Losses H3K27ac 0.532 0.302 0.504 0.427 0.054 0.208 0.373 0.575 0.138 0.507 0.078 0.160 0.132
Copy Number Losses H3K4me3 0.009 0.126 0.328 0.326 0.043 0.103 0.250 0.569 0.120 0.335 0.049 0.029 0.039
Normal Copy Number Only WGS 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
Normal Copy Number Only H3K9me3 0.103 0.101 0.188 0.133 0.404 0.287 0.253 0.253 0.828 0.164 0.097 0.069 0.148
Normal Copy Number Only H3K27me3 0.059 0.080 0.075 0.077 0.034 0.266 0.098 0.155 0.680 0.083 0.051 0.045 0.022
Normal Copy Number Only H3K4me1 0.086 0.078 0.081 0.170 0.023 0.135 0.066 0.063 0.335 0.001 0.013 0.002 0.023
Normal Copy Number Only H3K36me3 0.081 0.089 0.077 0.068 0.008 0.035 0.037 -0.028 0.218 -0.054 -0.015 -0.032 0.036
Normal Copy Number Only H3K27ac 0.060 0.053 0.039 0.162 0.011 0.054 0.047 0.036 0.105 -0.015 0.015 -0.003 0.019
Normal Copy Number Only H3K4me3 0.028 0.031 0.023 0.088 0.011 0.022 0.047 0.036 0.092 0.008 0.021 0.024 0.039