STATISTIC |
|
CEMT_7 |
CEMT_8 |
CEMT_9 |
CEMT_1 |
CEMT_4 |
CEMT_5 |
CEMT_6 |
WT312 |
WT313 |
WT340 |
WT341 |
WT354 |
WT355 |
ensembl_tss_Plus_One.gains |
|
13681.000 |
681.000 |
3127.000 |
508.000 |
586.000 |
3676.000 |
760.000 |
665.000 |
3730.000 |
778.000 |
640.000 |
684.000 |
684.000 |
ensembl_tssStart_to_tssStop.gains |
|
2920.000 |
310.000 |
863.000 |
250.000 |
289.000 |
840.000 |
408.000 |
344.000 |
856.000 |
357.000 |
318.000 |
324.000 |
317.000 |
refseq_tss_Plus_One.gains |
|
2417.000 |
108.000 |
669.000 |
83.000 |
96.000 |
536.000 |
100.000 |
105.000 |
531.000 |
111.000 |
108.000 |
117.000 |
111.000 |
refseq_tssStart_to_tssStop.gains |
|
1751.000 |
119.000 |
498.000 |
100.000 |
114.000 |
426.000 |
109.000 |
124.000 |
409.000 |
121.000 |
119.000 |
128.000 |
132.000 |
ensembl_tss_Plus_One.losses |
|
1129.000 |
1073.000 |
1039.000 |
6553.000 |
6482.000 |
2313.000 |
6964.000 |
923.000 |
22391.000 |
943.000 |
12233.000 |
6279.000 |
7051.000 |
ensembl_tssStart_to_tssStop.losses |
|
598.000 |
586.000 |
554.000 |
2449.000 |
2443.000 |
1113.000 |
2545.000 |
524.000 |
4261.000 |
528.000 |
2741.000 |
2247.000 |
2403.000 |
refseq_tss_Plus_One.losses |
|
262.000 |
251.000 |
235.000 |
1505.000 |
1492.000 |
458.000 |
1606.000 |
224.000 |
3851.000 |
222.000 |
2202.000 |
1488.000 |
1598.000 |
refseq_tssStart_to_tssStop.losses |
|
235.000 |
216.000 |
203.000 |
1097.000 |
1088.000 |
379.000 |
1167.000 |
207.000 |
2712.000 |
213.000 |
1557.000 |
1086.000 |
1185.000 |
mean(sizes) |
|
770620.971 |
770620.971 |
382475.872 |
649207.575 |
601472.595 |
522934.049 |
672046.689 |
258214.195 |
1165934.651 |
300411.995 |
769244.273 |
646403.132 |
608176.687 |
sd(sizes) |
|
3672754.436 |
3672754.436 |
2500076.532 |
5826835.890 |
4494791.372 |
2882359.958 |
5339835.943 |
2196444.964 |
5569058.848 |
2358940.633 |
5858445.723 |
4617693.445 |
4375309.886 |
mean(sizes|gain) |
|
971667.608 |
971667.608 |
317564.603 |
186450.927 |
181049.842 |
523138.704 |
207593.202 |
190705.399 |
391118.154 |
272186.143 |
250681.236 |
274399.813 |
259924.393 |
sd(sizes|gain |
|
3965445.645 |
3965445.645 |
1780512.474 |
1461164.514 |
1437096.529 |
2499813.312 |
1469420.361 |
1447820.680 |
1821774.445 |
1884798.539 |
1812655.394 |
1992652.037 |
1856462.043 |
mean(sizes|loss) |
|
476192.016 |
476192.016 |
474620.029 |
1178072.315 |
1105561.567 |
522692.636 |
1226249.643 |
341463.383 |
2040480.005 |
335875.246 |
1472426.613 |
1070775.850 |
955024.738 |
sd(sizes|loss) |
|
3183835.501 |
3183835.501 |
3263714.832 |
8365277.639 |
6449905.622 |
3283149.426 |
7717320.877 |
2864347.370 |
7810068.041 |
2849866.861 |
8705260.608 |
6394893.563 |
5883205.319 |
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Comparison type |
Library Type |
CEMT_7 |
CEMT_8 |
CEMT_9 |
CEMT_1 |
CEMT_4 |
CEMT_5 |
CEMT_6 |
WT312 |
WT313 |
WT340 |
WT341 |
WT354 |
WT355 |
All (Gains, Losses, Normal) |
WGS |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
All (Gains, Losses, Normal) |
H3K9me3 |
0.829 |
0.839 |
0.832 |
0.264 |
0.629 |
0.498 |
0.839 |
0.860 |
0.826 |
0.646 |
0.554 |
0.617 |
0.796 |
All (Gains, Losses, Normal) |
H3K27me3 |
0.786 |
0.667 |
0.653 |
0.163 |
0.087 |
0.453 |
0.747 |
0.738 |
0.773 |
0.320 |
0.197 |
0.222 |
0.219 |
All (Gains, Losses, Normal) |
H3K4me1 |
0.498 |
0.209 |
0.211 |
0.310 |
0.053 |
0.251 |
0.657 |
0.639 |
0.524 |
0.141 |
0.132 |
0.180 |
0.111 |
All (Gains, Losses, Normal) |
H3K36me3 |
0.480 |
0.199 |
0.186 |
0.145 |
0.022 |
0.065 |
0.462 |
0.331 |
0.374 |
0.044 |
0.042 |
0.091 |
0.143 |
All (Gains, Losses, Normal) |
H3K27ac |
0.433 |
0.154 |
0.118 |
0.261 |
0.021 |
0.092 |
0.472 |
0.523 |
0.181 |
0.039 |
0.075 |
0.101 |
0.082 |
All (Gains, Losses, Normal) |
H3K4me3 |
0.005 |
0.025 |
0.038 |
0.164 |
0.021 |
0.036 |
0.260 |
0.396 |
0.164 |
0.027 |
0.039 |
0.022 |
0.045 |
Copy Number Gains |
WGS |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
Copy Number Gains |
H3K9me3 |
0.893 |
0.887 |
0.867 |
0.608 |
0.770 |
0.734 |
0.874 |
0.900 |
0.821 |
0.818 |
0.802 |
0.863 |
0.890 |
Copy Number Gains |
H3K27me3 |
0.875 |
0.861 |
0.828 |
0.377 |
0.381 |
0.743 |
0.864 |
0.886 |
0.815 |
0.775 |
0.619 |
0.740 |
0.634 |
Copy Number Gains |
H3K36me3 |
0.721 |
0.749 |
0.481 |
0.314 |
0.108 |
0.237 |
0.848 |
0.874 |
0.698 |
0.515 |
0.416 |
0.648 |
0.773 |
Copy Number Gains |
H3K4me1 |
0.720 |
0.787 |
0.569 |
0.651 |
0.277 |
0.619 |
0.860 |
0.892 |
0.745 |
0.729 |
0.646 |
0.757 |
0.647 |
Copy Number Gains |
H3K27ac |
0.702 |
0.772 |
0.397 |
0.489 |
0.117 |
0.288 |
0.855 |
0.885 |
0.424 |
0.453 |
0.614 |
0.628 |
0.563 |
Copy Number Gains |
H3K4me3 |
0.004 |
0.295 |
0.131 |
0.382 |
0.127 |
0.107 |
0.849 |
0.879 |
0.429 |
0.334 |
0.415 |
0.220 |
0.466 |
Copy Number Gains + Losses |
WGS |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
Copy Number Gains + Losses |
H3K9me3 |
0.883 |
0.868 |
0.851 |
0.599 |
0.731 |
0.707 |
0.863 |
0.886 |
0.771 |
0.757 |
0.767 |
0.844 |
0.890 |
Copy Number Gains + Losses |
H3K27me3 |
0.865 |
0.825 |
0.799 |
0.417 |
0.386 |
0.719 |
0.848 |
0.850 |
0.763 |
0.702 |
0.531 |
0.696 |
0.612 |
Copy Number Gains + Losses |
H3K36me3 |
0.716 |
0.731 |
0.479 |
0.371 |
0.109 |
0.250 |
0.819 |
0.818 |
0.606 |
0.477 |
0.180 |
0.511 |
0.655 |
Copy Number Gains + Losses |
H3K4me1 |
0.714 |
0.759 |
0.560 |
0.636 |
0.264 |
0.592 |
0.847 |
0.858 |
0.671 |
0.666 |
0.453 |
0.682 |
0.539 |
Copy Number Gains + Losses |
H3K27ac |
0.696 |
0.751 |
0.397 |
0.502 |
0.088 |
0.280 |
0.826 |
0.862 |
0.361 |
0.433 |
0.303 |
0.503 |
0.422 |
Copy Number Gains + Losses |
H3K4me3 |
0.004 |
0.283 |
0.133 |
0.419 |
0.097 |
0.109 |
0.790 |
0.842 |
0.342 |
0.318 |
0.163 |
0.140 |
0.277 |
Copy Number Losses |
WGS |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
Copy Number Losses |
H3K9me3 |
0.591 |
0.457 |
0.551 |
0.461 |
0.569 |
0.545 |
0.506 |
0.570 |
0.469 |
0.655 |
0.317 |
0.461 |
0.157 |
Copy Number Losses |
H3K27me3 |
0.556 |
0.382 |
0.562 |
0.350 |
0.176 |
0.536 |
0.481 |
0.575 |
0.471 |
0.676 |
0.209 |
0.293 |
0.109 |
Copy Number Losses |
H3K4me1 |
0.560 |
0.319 |
0.567 |
0.455 |
0.136 |
0.453 |
0.452 |
0.574 |
0.302 |
0.676 |
0.131 |
0.260 |
0.124 |
Copy Number Losses |
H3K36me3 |
0.566 |
0.318 |
0.533 |
0.319 |
0.042 |
0.253 |
0.390 |
0.569 |
0.238 |
0.574 |
0.044 |
0.114 |
0.103 |
Copy Number Losses |
H3K27ac |
0.532 |
0.302 |
0.504 |
0.427 |
0.054 |
0.208 |
0.373 |
0.575 |
0.138 |
0.507 |
0.078 |
0.160 |
0.132 |
Copy Number Losses |
H3K4me3 |
0.009 |
0.126 |
0.328 |
0.326 |
0.043 |
0.103 |
0.250 |
0.569 |
0.120 |
0.335 |
0.049 |
0.029 |
0.039 |
Normal Copy Number Only |
WGS |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
1.000 |
Normal Copy Number Only |
H3K9me3 |
0.103 |
0.101 |
0.188 |
0.133 |
0.404 |
0.287 |
0.253 |
0.253 |
0.828 |
0.164 |
0.097 |
0.069 |
0.148 |
Normal Copy Number Only |
H3K27me3 |
0.059 |
0.080 |
0.075 |
0.077 |
0.034 |
0.266 |
0.098 |
0.155 |
0.680 |
0.083 |
0.051 |
0.045 |
0.022 |
Normal Copy Number Only |
H3K4me1 |
0.086 |
0.078 |
0.081 |
0.170 |
0.023 |
0.135 |
0.066 |
0.063 |
0.335 |
0.001 |
0.013 |
0.002 |
0.023 |
Normal Copy Number Only |
H3K36me3 |
0.081 |
0.089 |
0.077 |
0.068 |
0.008 |
0.035 |
0.037 |
-0.028 |
0.218 |
-0.054 |
-0.015 |
-0.032 |
0.036 |
Normal Copy Number Only |
H3K27ac |
0.060 |
0.053 |
0.039 |
0.162 |
0.011 |
0.054 |
0.047 |
0.036 |
0.105 |
-0.015 |
0.015 |
-0.003 |
0.019 |
Normal Copy Number Only |
H3K4me3 |
0.028 |
0.031 |
0.023 |
0.088 |
0.011 |
0.022 |
0.047 |
0.036 |
0.092 |
0.008 |
0.021 |
0.024 |
0.039 |