Information for 24-NCTCGAGCTTAN (Motif 35)

G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
Reverse Opposite:
A G T C G C A T T C G A C T G A T A C G G A T C G A C T A T G C T A C G C T G A C T A G C T A G
p-value:1e-30
log p-value:-7.082e+01
Information Content per bp:1.446
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.2 +/- 65.0bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:NCTCGAGCTTAN
---CAAGCTT--
 G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---NCTCGAGCTTAN
GRTGMTRGAGCC---
 A C G T A C G T A C G T G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-NCTCGAGCTTAN
GGCACGTGCC---
 A C G T G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:NCTCGAGCTTAN
GCTCGGSCTC--
 G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:NCTCGAGCTTAN
----CAGCC---
 G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:NCTCGAGCTTAN-
-----GGATTAGC
 G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---NCTCGAGCTTAN
TGACCTTGACCT---
 A C G T A C G T A C G T G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:NCTCGAGCTTAN
---NGGGATTA-
 G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:NCTCGAGCTTAN
----RGGATTAR
 G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G
A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:NCTCGAGCTTAN-
----GGGATTANN
 G A T C G A T C G A C T A T G C T A C G C T G A C T A G A T G C G A C T A G C T C G T A T C A G A C G T
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G