Information for 21-AGGATTATTA (Motif 33)

C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A
Reverse Opposite:
A C G T C T G A C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T
p-value:1e-38
log p-value:-8.943e+01
Information Content per bp:1.970
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets96.4 +/- 48.2bp
Average Position of motif in Background113.5 +/- 48.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AGGATTATTA
NGGATTAA--
 C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGGATTATTA
VRGGATTARN-
 A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGGATTATTA
GGGATTAA--
 C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGGATTATTA
RGGATTAR--
 C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGGATTATTA
NGGGATTA---
 A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGGATTATTA
CGGATTAN--
 C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGGATTATTA
GGGATTANN-
 C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AGGATTATTA---
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----AGGATTATTA--
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----AGGATTATTA--
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A G C T C G T A A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A